| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1055 |
|---|
| Symbol | |
|---|
| ID | 7859829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1196223 |
|---|
| End bp | 1197464 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865140 |
|---|
| Product | Cystathionine gamma-synthase |
|---|
| Protein accession | YP_002881078 |
|---|
| Protein GI | 229819552 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.621556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGCC TGACGACCAT GACCCACCAC GACGCCGGCG ACGCGACCGA GGCCCCCGAC
TGGTCGAAGC ACGGACCGGC CACCCGGGCG ATCCACGCCG GCTCCGAACC GGACGCGGCC
ACGGGCGCCG TCGTCCCGCC CGTGTACCTG ACGTCGACGT ACAAGCAGGA CGGCGTCGGC
GGACTGCGCG GCGGGTACGA GTACTCGCGC TCCGCGAACC CCACGAGGAC CGCGCTCGAG
ACGGCGCTCG CCGCCGCCGA GCTCGGCGAG CGGGCGTTCG CGTTCGCGTC CGGCCTGGCG
GCGGAGGACG TGCTGCTCCG GTCGGTGCTC GCGCCCGGCG ACCACCTCGT CATCCCCGAC
GACGCCTACG GCGGCACGTA CCGCCTGATC GCGCGCGTGC TCGCGCCCTG GGGGATCGAG
CACACGGCCG TCGACACGAC GTCGCCAGCG GCGGTCGCAG CCGCGGTGCG ACCGACGACC
CGCGCGATCT GGGTCGAGAC GCCGTCGAAC CCGCTGCTGG GGATCTCACC CCTGACCCTG
CTCGCCGGGA TCGCGCGCGA CGCCGACGCG CTCCTCGTCG TCGACAACAC GTTCGCCAGT
CCCGCGCTGC AGCTCCCGCT GACGCTGGGC GCCGACGCCG TCGTCCACTC GACCACGAAG
TACATCGGGG GGCACTCCGA CGTCGTGGGT GGCGCGCTCG TGCTGCGTGA AGGCGTCCGC
CTGCCGGGCG GGAACCCGGG TCCGACCGGC TCCGGCTCGC TCCTCGACGC CGTGGCGTTC
CACCAGAACG CCGCAGGCGC CGTCGCCGGC CCGTTCGACG CGTGGCTCAC GCTCCGCGGG
CTGAAGACGC TCGGCGTGCG CATGGCCCAG CACAGCCGGA ACGCCGCGGC CGTGGCCGAG
TTCCTCGCCG CGCATCCCGT CGTCGAGCAC GTGATCTACC CGGGACTGCC GGACCACCCC
GGCCACGACG TCGCGGCCAC CCAGATGAGC GGGTTCGGCG GGATGGTCAG CATGCGGGTC
GGGTCCGAGG CGCGGGCGCT CGAGGTGTGC GACAGGACCC GCGTGTTCAC GCTCGGGGAG
TCGCTGGGCG GCGTGGAGTC GCTCATCGAG CACCCCGCGC GGATGACGCA CGCGTCGGTC
GCCGGGTCGG CGCTCGAGGT GCCGGCGGAC CTCGTGCGGC TGTCCGTGGG CATCGAGGAC
GTCGCCGACC TGCTGGCGGA CCTCGAGCGC GCCCTGGCCT GA
|
|---|
| Protein sequence | MASLTTMTHH DAGDATEAPD WSKHGPATRA IHAGSEPDAA TGAVVPPVYL TSTYKQDGVG
GLRGGYEYSR SANPTRTALE TALAAAELGE RAFAFASGLA AEDVLLRSVL APGDHLVIPD
DAYGGTYRLI ARVLAPWGIE HTAVDTTSPA AVAAAVRPTT RAIWVETPSN PLLGISPLTL
LAGIARDADA LLVVDNTFAS PALQLPLTLG ADAVVHSTTK YIGGHSDVVG GALVLREGVR
LPGGNPGPTG SGSLLDAVAF HQNAAGAVAG PFDAWLTLRG LKTLGVRMAQ HSRNAAAVAE
FLAAHPVVEH VIYPGLPDHP GHDVAATQMS GFGGMVSMRV GSEARALEVC DRTRVFTLGE
SLGGVESLIE HPARMTHASV AGSALEVPAD LVRLSVGIED VADLLADLER ALA
|
|---|
| |