Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1042 |
Symbol | |
ID | 7859816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1182896 |
End bp | 1184032 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643865127 |
Product | protein of unknown function DUF88 |
Protein accession | YP_002881065 |
Protein GI | 229819539 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.18689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGCCG ACGAGCGCTT GGCCGTGTTC CTGGACTACG AGAACCTCGC GCTCGGTGCG CGCGAGCACC TCGGGGGGAT GGCGTTCGAC TTCGGGCCGA TCGCCGACGC TCTCGCTGTG CGAGGACGCG TGGTCGTGCG GCGCGCGTAC GCGGACTGGT CGTACTTCGA CGACGACCGG CGCGCCCTCA CCCGGCACCA GGTCGAGCTC ATCGAGATGC CGCAGCGCAT GGGCGCGTCG CGGAAGAACG CCGCCGACAT CAAGATGGTC GTGGACGCGA TCGAGATGGC GTTCGAGCGG GAGTACATCT CGACGTTCGT CATGTGTACA GGGGACAGCG ACTTCTCGCC GCTCGTGCAC AAGCTCCGCG AGCTGAACAA GCGCGTGATC GGGGTCGGCG TCGAGAACTC CACGTCCCGG CTGCTGCCGC CGGCCTGCGA CGAGTTCTTG TTCTACGACC GGCTCGAGGG TGTCGACGTC CCGGACGAGC CGGCACCGAC CACGCGTCGC GGCTCGGGCC GCCGGGCGGC GGCGGCGCCG GCCCCTGCCG AGCCGGCGCC CGGCGCGGGG CAGCCGGTCG TCGTCGACCC GGCCACGGCC ACGGATCAGG AGGCGCCGGA CGCCGCGGCC GCGCGCCAGG ACGCCGACGG CGCGGAGCCC GCCGAGGAGC AGCCCGAGCT CGCGGTGCGG ATCGCCCAGA CGTTGAGCGA CCTCGAGGCC TCGGCCGGCG GCACGGTCAC GGCGTCACTG CTCAAGCGGA CGCTGCTGCG CAAGGACCCG ACGTTCAGCG AGGCCGACTA CGGCTACCGC GCGTTCGGGG AGCTGCTGCG CCATCTCGCC GACGACGGCG TCGTCGAGCT GTCCGCCGGC CCGGCCGCCG GCGACCCGCA GATCGCGCTG CCCGAGCAGG GCGACCGCGC CGAGGCGTTC GCCCTGGTGC GGTCGGTGGT CGCCGAGGCG GGCGGCCGGG CGGCCCTGTC CGGCCTCAAG AACAAGCTGC GCAAGGCGCG CCCCGCGTTC AGCGAGAAGT CGCTCGGCTT CCGCGGGTTC CTGCAGTTCT GCAAGGCGGC ACAGGAGGCC GGCGTCGTCG CCCTCGCATG GGACGACGAC GCCGACGACT ACCTCGTCAC CGTGTGA
|
Protein sequence | MDADERLAVF LDYENLALGA REHLGGMAFD FGPIADALAV RGRVVVRRAY ADWSYFDDDR RALTRHQVEL IEMPQRMGAS RKNAADIKMV VDAIEMAFER EYISTFVMCT GDSDFSPLVH KLRELNKRVI GVGVENSTSR LLPPACDEFL FYDRLEGVDV PDEPAPTTRR GSGRRAAAAP APAEPAPGAG QPVVVDPATA TDQEAPDAAA ARQDADGAEP AEEQPELAVR IAQTLSDLEA SAGGTVTASL LKRTLLRKDP TFSEADYGYR AFGELLRHLA DDGVVELSAG PAAGDPQIAL PEQGDRAEAF ALVRSVVAEA GGRAALSGLK NKLRKARPAF SEKSLGFRGF LQFCKAAQEA GVVALAWDDD ADDYLVTV
|
| |