Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1010 |
Symbol | |
ID | 7859783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1150295 |
End bp | 1152214 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643865094 |
Product | ABC transporter related |
Protein accession | YP_002881033 |
Protein GI | 229819507 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0384863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTATC GATCCCTGTC GCGCGACCGG AGCGTGACGA GGCAGAAGCT CGCGCCCGGC ACCGTGCGCC GCATCCTGCG CTACGCACGG CCGTACCGCT TCCTCGTGGC CGGGTTCCTC GTGCTCGTCG TCCTCGGCGC CCTGCTCATC GTCGCGACGC CGCTGCTGCT GCAGCGGATC GTCGACGACG GCGTGGCCCA GGGGAACCGC GGCCTGGTGA TCGGGCTCGC CGGCGCCGTC GCCGTCGTCG CCCTCCTCGA GGCGGGGCTC GGCGTCCTGC AACGCTGGCT CTCCGTGCGC ATCGGGGAGG GGCTGATCTT CGACCTGCGC ACCGACGTCT TCGCCCACGT GCAGCGACAG TCGGTCCAGT TCTTCACCCG CACGCAGACC GGGTCGCTGG TGACCCGCCT GAACTCCGAC GTGATCGGGG CGCAGCAGGC GTTCACGTCG ACGCTCTCGG GCGTCGTCTC GAACCTCATC TCGGTGGTTG TGGTGCTCGT CACGATGTTC ACGCTGTCGT GGCAGATCAC GCTGCTCTCC CTCGTCGTCG TCCCGTTCCT GCTGCTGCCC GCGCGGCGCG TCGGGCGCCG GCTCGCCGGT CTGACCCGTG AGGGGATGCA GCTCAACGCC GAGCTCGGCA ACCGGATGAC GGAGCGCTTC AACGTCGCGG GCGCCATGCT CGTCAAGCTG TTCGGCTCGC CGGACCGCGA GGACGCCGAG TACGCGGACC GCGCGGGCCG GGTACGGGAC ATCGGCGTCC GGACGGCGAT GAGCAGCCGC GTGTTCTTCG CGGCGCTGGG CGCGATGGCC GCGCTCGCGA CGGCGGCCGT CTACGGCGTC GGCGGCGTGC TCGCGATCGC CGGTTCGCTG ACCATCGGCG CGCTCGTCGC GTTCGCGGGG CTGCTCGGGC GCCTGTACGG TCCGGTCGCG TCGCTGAGCA ACGTGCAGGT CGACGTCATG ACGGCGCTCG TCTCGTTCGA GCGGGTCTTC GAGGTGCTGG ACCTCCAACC GGCGATCGAG GACCGTCCGG ACGCCGTCGA CCTCCCCGAC GGGCCGCTGC GGGTGGAGCT GGCGGACGTC CGGTTCGCCT ACCCGTCGGC GGCGACGGCG TCCCTCGCCT CGCTCGAGGC GCCCGGGGAC GCCGACGACG GCGCCGCGCC CGTCGCGCCG TCGTCGTGGG GTGCCGAGGG GGAGGCGGAG ATCCTGCACG GGGTCTCGCT CGCCGTCGAC CCGGGCCACG TCCTGGCGCT CGTCGGACCG TCGGGCGCCG GGAAGACGAC CATCGCGAAC CTCGTGGTGC GCCTGAACGA CCCGACGTCC GGCGTCGTGC GCATCGGCGG TCACGACCTG CGCGACGTGC GGCAGGGCGC CGTCCACGAG GCCGTCGGCA TGGTCACGCA GGACGCGCAC ATGTTCCACG ACACCGTGCG CGCGAACCTG GCGTACGCGC GGCCGGACGC GTCCGAGGCC CAGATGTGGG ACGCGCTGCG GGGAGCCCAC GTGGACGACG TCGTCACGCG CCTGCCGCAG GGGCTCGAGA CGGTCGTGGG GGAGCGGGGT CACCGCCTGT CCGGCGGCGA GAAGCAGCGG CTCGCGATCG CGCGACTGCT GCTCCGCGCC CCTCGGGTGG TCGTGCTCGA CGAGGCGACG GCGCACCTGG ACTCCGAGTC GGAGGCGGCC GTCCAGCGCG CCCTCGACGC GGCGATGACG GGGCGGACGT CGATCGTCAT CGCGCACCGG CTCTCCACGG TGCGGCGCGC GGACGAGATC GTCGTCGTCG ACGCGGGGGT CGTCGTCGAG CGCGGGACGC ACGCGGAGCT GCTGGCGGCG CGCGGCCTGT ACGCGGAGCT GTACGCGACG CAGTTCGCCG GGGCCGACGT CGCGCCCGCG GGCGCCGGCG GCGCGACGCC GACCGACTGA
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Protein sequence | MTYRSLSRDR SVTRQKLAPG TVRRILRYAR PYRFLVAGFL VLVVLGALLI VATPLLLQRI VDDGVAQGNR GLVIGLAGAV AVVALLEAGL GVLQRWLSVR IGEGLIFDLR TDVFAHVQRQ SVQFFTRTQT GSLVTRLNSD VIGAQQAFTS TLSGVVSNLI SVVVVLVTMF TLSWQITLLS LVVVPFLLLP ARRVGRRLAG LTREGMQLNA ELGNRMTERF NVAGAMLVKL FGSPDREDAE YADRAGRVRD IGVRTAMSSR VFFAALGAMA ALATAAVYGV GGVLAIAGSL TIGALVAFAG LLGRLYGPVA SLSNVQVDVM TALVSFERVF EVLDLQPAIE DRPDAVDLPD GPLRVELADV RFAYPSAATA SLASLEAPGD ADDGAAPVAP SSWGAEGEAE ILHGVSLAVD PGHVLALVGP SGAGKTTIAN LVVRLNDPTS GVVRIGGHDL RDVRQGAVHE AVGMVTQDAH MFHDTVRANL AYARPDASEA QMWDALRGAH VDDVVTRLPQ GLETVVGERG HRLSGGEKQR LAIARLLLRA PRVVVLDEAT AHLDSESEAA VQRALDAAMT GRTSIVIAHR LSTVRRADEI VVVDAGVVVE RGTHAELLAA RGLYAELYAT QFAGADVAPA GAGGATPTD
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