Gene Bcav_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0995 
Symbol 
ID7859768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1127956 
End bp1129098 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content75% 
IMG OID643865079 
ProductProtein of unknown function DUF1972 
Protein accessionYP_002881018 
Protein GI229819492 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00615148 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGATCG CCATGATCGG GACCAGGGGC GTGCCGGCGC GCTACGGCGG GTTCGAGACG 
TGCGTCGAGG AGGTGGGGCG CCGGCTGGCG GACGCCGGGC ACGACGTCGT CGTCTACTGC
CGGGGTACCG ACGGTTCCGA CGCCGGGCCG CGTCACCTGG GCATGCGGCG CGTGGTGCTG
CCCGCCGTCC GGCACCGGAC GCTGGAGACG CTCAGCCACT CCGGGCTCTC GGTGGCCCAT
CTCGTCGGGC ACCGCACGGA CGTCGCGCTG GTGTTCAACG CCGCGAACGC GCCGTGGCTG
CCCGTCGTGC GGGCGGCCGG CATCCCGGTG GCCACGCACG TCGACGGCCT CGAGTGGAAG
CGCGCGAAGT GGGGTGGCGC CGGGCGCCGG TACTACCGGT GGGCCGAGCG CCGGGCCGTG
GCGTGGTCCC ACGCGCTCAT CGCCGACGCC CAGGGGATCG CCGACTACTA CCGCGACGAG
CACGACGCCG CGACCCACCT CATCGCGTAC GGCGCGCCAC GCCTGCAGGG GGTCGGCACG
GGCCGGCTCG CCGAGCTCGA CCTCGAGGAC GGGTCGTACC ACCTCGTCGT CGCCCGCTTC
GAGCCGGAGA ACCACGTGCT CGAGATCGTC CGCGGCTACG TGCGCAGCGA CGCGACCCGG
CCGCTCGTCG TCGTCGGGTC GGCCCCGTAC GCACACGCGT ACGTCCAGCA GGTGCGGGCC
GCCGCCGATC CGCGCGTCCG GCTCCTCGGC GGCGTCTGGG ACCAGGATCT GCTCGACCAG
CTCTACGCCG GGGCGTACAC CTATCTCCAC GGCCACAGCG TCGGCGGCAC GAACCCGTCG
CTGCTGCGGG CGATCGGCGC GGGCACCGCG ACCATCGCGT ACGACGTCGG CTTCAACCGT
GAGGTGCTCG GCGACGCCGG CCGCTACTTC ACCGGGCCGG CGGACCTCGC GGAGCGGCTG
CACGCCGCCG AGGCCGACCC GCAGGGGACG CGGCGGCGGG CGACGGCGCT CGCCGTGCGC
GCCGGCGACT ACGACTGGGA CCGTGTCGCG GCGCAGTACG AGGACCTGTG CCGCGAGCTG
GCCGGGAAGG GCGCGAGCGT GCCCCGGCCG TCGCGGCAGC GTGTGGTGGA GGTGTCACGA
TGA
 
Protein sequence
MRIAMIGTRG VPARYGGFET CVEEVGRRLA DAGHDVVVYC RGTDGSDAGP RHLGMRRVVL 
PAVRHRTLET LSHSGLSVAH LVGHRTDVAL VFNAANAPWL PVVRAAGIPV ATHVDGLEWK
RAKWGGAGRR YYRWAERRAV AWSHALIADA QGIADYYRDE HDAATHLIAY GAPRLQGVGT
GRLAELDLED GSYHLVVARF EPENHVLEIV RGYVRSDATR PLVVVGSAPY AHAYVQQVRA
AADPRVRLLG GVWDQDLLDQ LYAGAYTYLH GHSVGGTNPS LLRAIGAGTA TIAYDVGFNR
EVLGDAGRYF TGPADLAERL HAAEADPQGT RRRATALAVR AGDYDWDRVA AQYEDLCREL
AGKGASVPRP SRQRVVEVSR