| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0986 |
|---|
| Symbol | |
|---|
| ID | 7859759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1119053 |
|---|
| End bp | 1120621 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865070 |
|---|
| Product | UDP-N-acetylglucosamine pyrophosphorylase |
|---|
| Protein accession | YP_002881009 |
|---|
| Protein GI | 229819483 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
|---|
| TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00712169 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCATC CCCGTCCTGC CGCCGCCGTC GTCCTCGCCG CCGGCGAGGG CACCCGGATG
CGGTCGTCAG TCCCGAAGAT GCTGCACGAG ATCGGCGGTC GATCCCTCGT CGGGCACGCG
CTCACCGCAG CGCAGGGCAT CGCGCCCGAG CGCATCGCCG TGGTGGTCCG GCACGGGCGG
GACGCCGTCG CCGCGCACGT CACCCAGCTC GACCCGAGCG TGCTCGTGGT CGACCAGGAC
GAGATCCCGG GCACGGGTCG AGCCGTGCAG TGCGCGCTCG CCGACCTGGA CGCCGCTGCC
CAGGCGCAGC TCGCCCGGAG CGGGAGCCCC GCCCAGGACG GCAAGGTGAC GGGCGCCGTC
GTCGTCCTCG CCGGCGACGT CCCGCTGCTC GACGCCGCCA CGCTCGACCA GCTGCTCGAG
GCGCACCACG CCGACGGCAA CGCCGTGACG GTGCTGACCA CGCACGTTCC GGATCCCACC
GGGTACGGGC GGATCCTGCG CGAGGAGGGC ACCGGCGACG TGCTCGGCAT CGTGGAGGAG
GCCGACGCGG ACGCCGACCA GCGCGCCCTC GACGAGATCA ACACCGCCGT GTACGTGTTC
GACGCCACGG CGCTGCGCGA CGCGCTGCGC ACGCTGGACG GCGACGACGC CCGCCGGAAC
GCGCAAGGCG AGGTCTACCT GACCGACGTG CTGGCCCTCG CGCGGGACGC GGGTGGCCTG
GTGCGCGCCG TCGCGACGGA GGACACCCCG AGCGTCGAAG GCGTGAACGA CCGCACGCAG
CTCGCCGCGC TCGGCGCGGA GCTGAACCGG CGCATCCTCG ACGGCTGGAT GCGTGAGGGC
GTCACGGTCG TCGACCCGGC CACGACGTGG GTCGACGTCG ACGTCGAGCT CTCCCGCGAC
GTCACGCTGC TGCCGGGGGT GCAGCTGCGG GGCACGACGC GCGTGGCCGA GGGCGCCACG
ATCGGACCCG ACACCACGCT GCTCGACGTC GAGGTCGGCG AGGGCGCCAC AGTCGTACGG
ACGCACGGCT CCGAGGCGCG GATCGGCGCC GGCGCGAAGG TCGGCCCGTT CGCGTACCTG
CGCCCGGGCA CGCACCTGGG GGAGCACGGG AAGATCGGGA CGTTCGTCGA GACCAAGAAC
GCGGAGATCG CCGACGGCGC GAAGGTGCCT CACCTCACCT ACGTGGGCGA CGCGACGATC
GGCGCGGGCT CGAACATCGG GGCCGGCGTC GTGTTCGCGA ACTACGACGG CGTCGCCAAG
CACCGCACCG ACGTCGGCGA GCACTCGTTC GTCGGCAGCG ACTCGGTGCT CGTCGCGCCG
ATCCGGCTGG CGGACGGCAC GTACGTCGCG GCGGGCTCGA CGATCACGCG CGACGTCGGA
CCCGGTGAGC TCGCCGTCGC TCGCGGCATC CAGCGCAACG TCGCCGGCTG GGTGCAGCGC
CGGCGCGCCG GGTCGCGGTC CGCGGAGGCG GCACAGGCGG CGCTCGAGAC CGAGGACCGG
TCGGACCTGT CGCCGCAGGC TCGCGCCGAG CTGGCGCGCC TGGCCAAGGA GAAGGAGTCC
GGTGCCTGA
|
|---|
| Protein sequence | MSHPRPAAAV VLAAGEGTRM RSSVPKMLHE IGGRSLVGHA LTAAQGIAPE RIAVVVRHGR
DAVAAHVTQL DPSVLVVDQD EIPGTGRAVQ CALADLDAAA QAQLARSGSP AQDGKVTGAV
VVLAGDVPLL DAATLDQLLE AHHADGNAVT VLTTHVPDPT GYGRILREEG TGDVLGIVEE
ADADADQRAL DEINTAVYVF DATALRDALR TLDGDDARRN AQGEVYLTDV LALARDAGGL
VRAVATEDTP SVEGVNDRTQ LAALGAELNR RILDGWMREG VTVVDPATTW VDVDVELSRD
VTLLPGVQLR GTTRVAEGAT IGPDTTLLDV EVGEGATVVR THGSEARIGA GAKVGPFAYL
RPGTHLGEHG KIGTFVETKN AEIADGAKVP HLTYVGDATI GAGSNIGAGV VFANYDGVAK
HRTDVGEHSF VGSDSVLVAP IRLADGTYVA AGSTITRDVG PGELAVARGI QRNVAGWVQR
RRAGSRSAEA AQAALETEDR SDLSPQARAE LARLAKEKES GA
|
|---|
| |