Gene Bcav_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0926 
Symbol 
ID7858147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1040101 
End bp1042395 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content75% 
IMG OID643865009 
ProductFAD linked oxidase domain protein 
Protein accessionYP_002880949 
Protein GI229819423 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACT ACGGCCACGA TCTGCTGTTC GGCACGTTCA TCACGCCGAC GGCGGACGAC 
CCCGAGCGGG TCGTGCAGCT CGCGGAGCTG ACCGAGTCGG CGGGGCTGGA TCTCGCCACG
TTCCAGGACC ACCCGTACAA CCCGCAGTTC CTCGACACCT GGACGCTGCT GAGCTGGGTC
GCGGCACGGA CGACGACGCT GCGGGTCGCC GGCAACGTGC TCAACGTGCC CTTGCGCCAG
CCGGCGGTGC TCGCGCGCGC CGCTGCGAGC CTCGACCGGC TCTCCGGGGG GCGGGTCGAC
CTGGCGCTCG GCGCGGGCGG CTTCTGGGAC CCGATCGTCG CGATGGGCGG CGACCGCCTG
ACGCCTGGCC AGAGCGTCGA CGCCCTCGGC GAGGCCATCG AGATCATCCG TAAGCTATGG
GACGCCGACA CCCGGGGTGG CGCGCGCGTG CCCGGTGAGT TCCATCGCGT CGAGGGCGCG
AAGCGCGGCC CGGCGCCCGC CCACGACATC CCGATCTGGG TCGGGGCTCT CAAGCCGCGG
ATGCTGCGAC TCGTCGGCCG GCAGGCGGAC GGCTGGCTCC CGTCGCTCAG CTACCTGACC
GAGCAGGGCA TCGCCCCCGC CAACGCCACG ATCGACGACG CCGCCGCGGA GGCCGGGCGC
GATCCGCGCG AGATCCGCCG GCTCCTCAAC CTGTTCGGCG GCCGGTTCGC GACGCTGGGC
CGTGGCTTCC TCGAGGGTCC GGCCGAGCAG TGGGTGGACG ACCTGCTCCC GTACGTCCTC
GAGCACGGCT TCAGCGCGTT CATCCTCGGT GGCGACGACC CCGAGACGTT CGCGCGGTTC
GGACAGGAGG TCGCTCCGGC GCTGCGCGAG GCCGTCGCGG CCGAGCGCCG CACCGCCGGG
ACGGCGACCG GCCGCGTCCG CCCCCCGCGC GCGCTCGAGC TCCGCCGCCC GGGGATCGAC
TACGACGGCG TGCCGGTAGC CCTGGCGCCC GACGCCGTCG AGCCCGGTGA TCGCGCGTAC
GGCAGCGTCC GTCACACCTA CGTGCACTCC GGCGCGCCGG GCCTCGTGCT GCGGCCGCGA
ACGACCGACG ACGTCGTCGC AGCCGTCGCG TACGCCCGTC GCCAGGACGT GCCGATCGCC
GTGCGCAGCG GCGGGCACGG CATCAGCGGC CGCTCGACGA ACGACGGCGG GATCGTCGTC
GACCTCGGAG CGATGAACGG GGTGGAGCTG CTCGACCGCG CGACGCGACG CGTGCTGGTC
GAGCCGGGCG CCCGCTGGGG CGACGTCGCC GCGGAGCTCA CGCCGCACGG CCTCGCGCTG
AGCTCGGGCG ACTCGGGCGA CGTCGGCGTG GGCGGGCTCG CGACGACCGG TGGGATCGGA
TTCCTCGGGC GGGCGCACGG CCTGACCATC GACCACCTGG TCGCCGCGGA GGTCGTGCTG
GCCGACGGCA CCGTCCGGCA CGTCGACGCC ACGCACGACC CTGAGCTGTT CTGGGGCATC
CGCGGCGCCG GCGCGAACTT CGGCATCGTG ACGAGGTTCG AGTTCGTCGC CGACGAGGTG
GGCGACGTCG TCCTCGGCCA GTTCCTGTTC GACGCCTCGG ACGCCGCGCC GCTCCTGGAG
GGCTGGGGCT CCGCCGTCGA GAACGCCCCG CGTGAGCTCA CCAGCTTCCT CACCCTGTTC
CCGGGGCGCG CCGGCCAGCC GCCGATGGCG CTCGCGATGG TGGTGTGGGC GGACGACGAC
GTCGATGCCG CCCAGGCGGC GCTCGCACCC TTCCTCGACC TCGCGCCGGT GCTCGACCGG
CGTGCACAGG TCGCGCCGTA CGCGGCGCTC GTCCCGGCCG CGCGGGAGCA CCACCATCAG
GGCTCGAGCT CGGCGGAGAT GCGGAGCGGG TTCCTCCCGA CGGTCGATGC GACCACCGCC
GAGCGGCTCG CGGCCATGCT CGCTGCCGGC GAGGCGTTCT TCGTGCAGCT GCGCGCCGTC
GGAGGCGCCG TCGCCGACGT CGCCCCCGAC GCGACCGCGT ATGCGCACCG CTCGGCCGCG
TTCTCGCTGA ACGCGACCCT GTCGCCTGCC CTCGTCGGGC GCGCCCGGGA GCACTGGGCC
GAGGTCGCGA CGGCGTTCGA CGGCATGTAC CTGAGCTTCG AGACCGGCAC CGGACCGGAG
GTGCTGGCCG CCGCGTTCCC GGAGCCCACC CTGACCCGGC TGCGCCGCCT CAAGGCCCAC
GTCGACCCGG ACGAGGTGTT CGGCACCAAC TTCCCGATCC CGCCGCTCGC CATCTCCGAC
GACGACGCCG CCTGA
 
Protein sequence
MPDYGHDLLF GTFITPTADD PERVVQLAEL TESAGLDLAT FQDHPYNPQF LDTWTLLSWV 
AARTTTLRVA GNVLNVPLRQ PAVLARAAAS LDRLSGGRVD LALGAGGFWD PIVAMGGDRL
TPGQSVDALG EAIEIIRKLW DADTRGGARV PGEFHRVEGA KRGPAPAHDI PIWVGALKPR
MLRLVGRQAD GWLPSLSYLT EQGIAPANAT IDDAAAEAGR DPREIRRLLN LFGGRFATLG
RGFLEGPAEQ WVDDLLPYVL EHGFSAFILG GDDPETFARF GQEVAPALRE AVAAERRTAG
TATGRVRPPR ALELRRPGID YDGVPVALAP DAVEPGDRAY GSVRHTYVHS GAPGLVLRPR
TTDDVVAAVA YARRQDVPIA VRSGGHGISG RSTNDGGIVV DLGAMNGVEL LDRATRRVLV
EPGARWGDVA AELTPHGLAL SSGDSGDVGV GGLATTGGIG FLGRAHGLTI DHLVAAEVVL
ADGTVRHVDA THDPELFWGI RGAGANFGIV TRFEFVADEV GDVVLGQFLF DASDAAPLLE
GWGSAVENAP RELTSFLTLF PGRAGQPPMA LAMVVWADDD VDAAQAALAP FLDLAPVLDR
RAQVAPYAAL VPAAREHHHQ GSSSAEMRSG FLPTVDATTA ERLAAMLAAG EAFFVQLRAV
GGAVADVAPD ATAYAHRSAA FSLNATLSPA LVGRAREHWA EVATAFDGMY LSFETGTGPE
VLAAAFPEPT LTRLRRLKAH VDPDEVFGTN FPIPPLAISD DDAA