Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0895 |
Symbol | |
ID | 7860260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 995016 |
End bp | 995918 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643864977 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002880918 |
Protein GI | 229819392 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.150269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.306181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACGA CCCTCGAACG CACGCCCACC CCGACGCCGG TGGCCACGCC GCCCGGACGC CGTCGGCAGC GGCGGCTCCT GACCCGGCTC CCGATCGACG GCGCCCTGTA CCTGACGATG ATCCTGGCGA TCCTCGTGAT GTCCGTGCCG CTCATCTGGA TGTTCCTCGC GAGCTTCAAG GAGCTCCCCG AGTTCGCGCA GATCCCGCTC CAGTGGCTCC CGGAGTCGTT CGACTTCTCG AACTTCGCCC AGGTCGCGTC GAGCATCCCG ATCGGGCGGA TGTTCCTCAA CAGCGTCATG ATCACGATCC TCGGCGCCGG CCTCAAGGTG ATCCTCGGCC TGGCGTGCGC CTACGCCATC GTCTTCATCG ATGTGCCGTT CAAGAAGACG GTCTTCTACC TCGTCCTCTT CGCTCTCCTG ATCCCGGGCC AGATCACGAT CATCCCGAAC TACACGCTCA TCGCGGATCT CGGCTGGCTC AACACCTACC AGGGCATCCT CGTGCCGGGC CTGGCCAGCG CGTTCGGCAC GTTCCTGTTC CGCCAGCACT TCCTGTCGCT CCCGATCTCC GTGATGGAGG CCGCAGAGGT CGACGGCGCT GGCCACTGGC GCCGTCTGTG GCGGTTCGTC GTCCCGATGT CCGTGCCGAC GATCGCCGCC GTGAGCCTCG TGTCGATCGT CGCGGAATGG AACGAGTACC TCTGGCCGAT GCTCGTCACC GACAACACGC GGACGATGAC GCTGCCCGTC GGTCTCACCC TGCTGCAGAG CCTCGACGGG CAGCAGAACT GGGGCGTGCT GATGGCGGCG AGCGCACTCG TGACCGTCCC GATCCTCCTC ATCTTCCTCA TCCTGCAGCG CCGTCTCGTC GCCGGTCTCA CCGCCGGCGC CGTCACCGGC TGA
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Protein sequence | MSTTLERTPT PTPVATPPGR RRQRRLLTRL PIDGALYLTM ILAILVMSVP LIWMFLASFK ELPEFAQIPL QWLPESFDFS NFAQVASSIP IGRMFLNSVM ITILGAGLKV ILGLACAYAI VFIDVPFKKT VFYLVLFALL IPGQITIIPN YTLIADLGWL NTYQGILVPG LASAFGTFLF RQHFLSLPIS VMEAAEVDGA GHWRRLWRFV VPMSVPTIAA VSLVSIVAEW NEYLWPMLVT DNTRTMTLPV GLTLLQSLDG QQNWGVLMAA SALVTVPILL IFLILQRRLV AGLTAGAVTG
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