Gene Bcav_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0845 
Symbol 
ID7860209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp941549 
End bp943018 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content72% 
IMG OID643864926 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_002880868 
Protein GI229819342 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.222515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.167552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGA CCCTGCCCAA CCCCGTCCCG ACGGCTGAGC CCGAGCGCCT CAGCCGGGAC 
AAGTTCGTCC TCATCGCCCT GCTTCTCGGC TCCGCCTTCG TCGTCATCCT CAACGAGACC
ACCATGAGCG TCGCGCTCGC GCCGCTCATG AAGGACCTCG GCATCACCGC CACCACGGGT
CAGTGGCTCA CCACGGCGTT CATGCTCACC ATGGCCGTCG TCATCCCTGC CACCGGCTAC
CTGCTGCAGC GGCTCGGTAC CCGCGGGGCG TACCTGCTCG CGATGTCCCT GTTCAGCGCG
GGCACCCTGC TCGCCGCCGT CTCGCCCACG TTCCCGATCC TGCTCGGCGC CCGGGTCGTC
CAGGCCTCCG GGACCGCGAT CATGATGCCG CTGCTCATGA CGACGATCAT GACGATCGTG
CCGACGTCGT CCCGCGGCAA GATCATGGGG AACGTCGCGA TCGTCATGGC CGCCGCGCCC
GCGCTCGGGC CCGCCATCTC CGGCGTCATC CTCAACTCGC TCGGGTGGCG GTGGGTCTTC
GGCATCGTGC TGCCGATCGC CCTGGTGTCG CTGGTGGCCG GGTTCCTGCA CGTGCGCGAC
ACGGGTGAGC GGACGCGCGC GCCGCTGGAC CCGCTGTCGC TGGTGCTCGC CGTGGTGGCG
TTCGGTGGGC TCGTGTACGG ACTGTCGAGT CTCGGCGAGG CCGCCCGGCA CGCGCCGCCG
GTGCCGCCGT GGATCCCGCT GACGGCGGGC TCGGTGATGC TCGTGGCGTT CGTCGCTCGT
CAGCTCCTGC TCCAGCGGAC CGACCGCGCG CTCCTCGACC TCCGCGTGTT CAGCTCGCGG
TCGTTCGCCG TCTCCCTCGG GATCATGGCC GTGTCGATGA TCGCGTTGTT CGGGTCGCTG
ATCCTGCTCC CGCTCTACCT GCAGGACTCG CTCAACCTCA CGTCCCTCAC CACCGGCCTG
ATCGTGCTGC CGGGCGGCCT CGCCATGGGC CTCCTCGGTC CGACCGTGGG GCGGCTGTTC
GACCGGGTCG GCCCCCGACC GCTGGTCATC CCGGGCGCCG CGGTGGTGCT CGGCGCGCTG
GGTCTCCTCA CGACCGTGAG CGCCGGCACG TCGCCGTGGT TCGTGCTCGG CGCGCACGTG
CTGCTGAGCC TCGGCCTGGC GTTCGTGTTC ACGCCGCTGT TCACGACGGC GCTCGGGGCC
CTCGAGCCGC ACCTGTACTC GCACGGCTCC GCCGTCATCG GCACGACGCA GCAGCTCGCC
GGGGCCGCGG GCACGGCCAT GTTCGTCGCG GTCATGACAC AGGGTTCCGT GGCGGCGGGG
GAGGCCGGGG CGTCGCCCGC GGCGGCGCTG GCCGACGGCG TCGGGACGGC GTTCGTGTGG
GGCGCGGCCT TCATGGCGCT CGCGTTCGCC CTGACGTTCC TGCTCCGCCG GCAGCCCGCC
GCGGAGCTGG AGCACGCCGT CGCGCACTGA
 
Protein sequence
MSATLPNPVP TAEPERLSRD KFVLIALLLG SAFVVILNET TMSVALAPLM KDLGITATTG 
QWLTTAFMLT MAVVIPATGY LLQRLGTRGA YLLAMSLFSA GTLLAAVSPT FPILLGARVV
QASGTAIMMP LLMTTIMTIV PTSSRGKIMG NVAIVMAAAP ALGPAISGVI LNSLGWRWVF
GIVLPIALVS LVAGFLHVRD TGERTRAPLD PLSLVLAVVA FGGLVYGLSS LGEAARHAPP
VPPWIPLTAG SVMLVAFVAR QLLLQRTDRA LLDLRVFSSR SFAVSLGIMA VSMIALFGSL
ILLPLYLQDS LNLTSLTTGL IVLPGGLAMG LLGPTVGRLF DRVGPRPLVI PGAAVVLGAL
GLLTTVSAGT SPWFVLGAHV LLSLGLAFVF TPLFTTALGA LEPHLYSHGS AVIGTTQQLA
GAAGTAMFVA VMTQGSVAAG EAGASPAAAL ADGVGTAFVW GAAFMALAFA LTFLLRRQPA
AELEHAVAH