Gene Bcav_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0839 
Symbol 
ID7860203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp934606 
End bp936009 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content74% 
IMG OID643864920 
Producthistidine kinase 
Protein accessionYP_002880862 
Protein GI229819336 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.969537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.20827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTCG TGGCCCTCTT CTCGGTGCTG CTCCTGGTCG CCCTCGTCGT GTTCGGCTTC 
GTCGCGCTGA CCCTGCTGCG CCGCACGCTC GTGCAGGAGG TCGACAGCCA GCTGCGCTCG
GCCGCGGAGA CGATCGTCAT CAACTCGGTC AACGCCCTCC CGAACCCGGG TGGCCCCGGC
CCGATCCCGA CCGACTACGC CGTGGTCATC GCGAACCTGG ACGGCTCTGT CGCGTGGCAG
TCGGCCTCCG GTGCGACTGC CGCGTTCCCC GACGTCGGCG ACCTCTCGCT CGGGCACGTA
CAAGAGCAGT CCCGGCATCC GTACACCGTC GGGTCCGAGG ACGGGCCGGT CCGCTGGCGG
GTGGTCGCCG GGCCGGTCGT GCGCGACGGG GCACCGATCG CGACCGCAGC CGTCGCGCTC
CCGCTCACCT CGGTCGAGGC GACGATGTCG GAGATGCGCA CGTGGCTGCT CGTGGTGAGC
GCCGCGGTCC TCGCGGGCGC CGCCGGAGCC GGCTACGTCG TCGTCCGCCG CAGCCTGCGC
CCCCTGCGCC GGATCGAGTC GACGGCGGCC GCGATCGCGG GCGGCGACCT CAGCCAACGC
GTCCCGCCCG AGCCGCCGAC CACCGAGGTC GGGTCGCTGA GCCGGTCGCT GAACATGATG
CTCGGGCAGG TCGAGGCGTC GTTCGCGCAG CGCACGGCGA GCGAGCGACG GATGCAGCGG
TTCGTCTCGG ACGCGAGCCA CGAGCTGCGC ACCCCGCTCG CCGCGATGCG CGGGTACGCC
GAGCTGTACC GCCTCGGGGG CATCCCCGAC GACGACGTCC CGCAGGTCAT GGAACGTCTC
GAGCGTGAGT CCGTGCGCAT GGGCTCGCTG GTGAACGACC TCCTGGCCCT CGCCCGGCTC
GACGAGGGCC GCGGCCTGCG GCTCGGCCAG GTGGACCTCG CGCAGCTCGC CGCCGACGCC
GCGGAGGACC TGCGCGCGAT CGACCCGGCC CGCACCGTCC GGGTGGAGGC CCCGGACGCC
GACGGGGACG GATGGGCGGT CGAGGGTGAC GCCGACCAGC TGCGCCAGGT CATGCTCAAC
CTCATCGGCA ACGTGGCGTC GTACACCCCG GCCGGGAGCC CGGTGGAGCT CGTCCTGGCC
CGGCCGACGG CCGACGCCGT CGTCCTCGAG GTCGTCGACC ACGGACCCGG GATCGCTCCC
GACGACGCGG CACGCGTGTT CGACCGCTTC TACCGCGTCG AGACCTCACG AAGCCGCAGC
GCCGGCGGCT CCGGCCTCGG GCTCGCGATC GTCGCGGCGA TCGTCGGCGC GCACGGAGGC
GCCGTGTCCG TCGTGCCGAC GCCCGACGGC GGGACGACCG TGCGGATCGA GCTCCCGGTT
CGGCCCGGCC GCTCCGCATC GTGA
 
Protein sequence
MRLVALFSVL LLVALVVFGF VALTLLRRTL VQEVDSQLRS AAETIVINSV NALPNPGGPG 
PIPTDYAVVI ANLDGSVAWQ SASGATAAFP DVGDLSLGHV QEQSRHPYTV GSEDGPVRWR
VVAGPVVRDG APIATAAVAL PLTSVEATMS EMRTWLLVVS AAVLAGAAGA GYVVVRRSLR
PLRRIESTAA AIAGGDLSQR VPPEPPTTEV GSLSRSLNMM LGQVEASFAQ RTASERRMQR
FVSDASHELR TPLAAMRGYA ELYRLGGIPD DDVPQVMERL ERESVRMGSL VNDLLALARL
DEGRGLRLGQ VDLAQLAADA AEDLRAIDPA RTVRVEAPDA DGDGWAVEGD ADQLRQVMLN
LIGNVASYTP AGSPVELVLA RPTADAVVLE VVDHGPGIAP DDAARVFDRF YRVETSRSRS
AGGSGLGLAI VAAIVGAHGG AVSVVPTPDG GTTVRIELPV RPGRSAS