Gene Bcav_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0823 
Symbol 
ID7859155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp920338 
End bp921051 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID643864904 
ProductMgtC/SapB transporter 
Protein accessionYP_002880846 
Protein GI229819320 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGGG CGTGGGCGAG CGAGACGACC GTCACGGAGC TGCAGCTGCT GGGGCTCGCC 
TTCGTGCTGT GCTCGATCAT CGGGCTGGAG CGGCAGTTCC ACCAGAAGAG CGCGGGGCTG
CGGACGCACA CGCTCGTGGG GATGGGCGCC GCGGTGTTCA CGCTGATCTC CGCGTACGGT
TTCGCGCACG TCCTGGGCGC CGACGTCACG CTCGACCCGT CGCGGATCGC GGCGCAGATC
GTCTCCGGCA TCGGCTTCCT CGGGGCCGGC GTCATCTTCA TGAGGCGGGA CATCGTGCGC
GGGCTCACGA CGGCGGCGAC GATCTGGGTC TCCGCCGCCG TGGGCATGGC GTGCGGGGCG
GGGATGCCGG TGCTCGCGAT CGCCACCACG GGACTGCACC TGGCGGCGAT CTTCGTGCTG
GCGCCCATCG GCCGTGCGCT GCCGACGCCG GACCGGCGCC GCCTGGTCGC GGTCCGGTAC
CGCGACGGCG AGGGCGTGCT GCGCTCGGTG CTCGCGACCG CCACCGACAT GGGCTTCCAG
GCGTCGATCA TCTCCACCTC CGTCGACGAG CAGCCGAGCG GCGCCCGGGT CGTGGCGATG
ACGGTGCGGT TCCGTGGCCG GACGCCGCTC CGCGATCTCG TGACGGCGCT CGCCGAGCTG
TCCGGCGTCG TCGGCGTCCA GTCGCAGGAC GACGAGACCG AGGACGACGA CTGA
 
Protein sequence
MGWAWASETT VTELQLLGLA FVLCSIIGLE RQFHQKSAGL RTHTLVGMGA AVFTLISAYG 
FAHVLGADVT LDPSRIAAQI VSGIGFLGAG VIFMRRDIVR GLTTAATIWV SAAVGMACGA
GMPVLAIATT GLHLAAIFVL APIGRALPTP DRRRLVAVRY RDGEGVLRSV LATATDMGFQ
ASIISTSVDE QPSGARVVAM TVRFRGRTPL RDLVTALAEL SGVVGVQSQD DETEDDD