Gene Bcav_0775 details

Gene Information

• Locus tag: Bcav_0775
• Symbol: ispF
• ID: 7859106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Beutenbergia cavernae DSM 12333
• Kingdom: Bacteria
• Replicon accession: NC_012669
• Strand: +
• Start bp: 863844
• End bp: 864323
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 79%
• IMG OID: 643864855
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002880798
• Protein GI: 229819272
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.196684
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.210781
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAGCCTCC CGCGCACCGG GATCGGGCTC GACGTGCACG CGTTCGCTGC CTCAGGCACG 
GGTCTGTGGC TCGCGGGGCT CCACTGGCCG GACGAACCCG CCCTCGAGGG TCACTCGGAC 
GGCGACGTCG CCGCCCACGC CGCGTGCGAC GCGCTGCTCT CCGCGGCCGG GCTCGGCGAC 
CTCGGGTCCA ACTTCGGCAC CGCGCGGCCG GAGTGGGCCG GTGCCGCGGG GGTCGCGCTC 
CTGAGCGAGG CGGCCGCCCG GGTGCGGGCC GCCGGGTTCG TGCCGGGCAA CGTCGCCGTC 
CAGGTGATCG GGACGCGGCC GAAGGTCGGG TCACGGCGGG CCGAGGCGGA GGCGGCGCTC 
GCGGAGGCGG CCGGCTGCCC CGTCTCGGTG AGCGCGACCA CGACTGACGG CCTCGGGTTC 
ACGGGCCGCG GCGAGGGGCT CGCGGCGATC GCGACGGCGC TGGTGCTGCC CGCCGGCTGA 

 

Protein sequence

MSLPRTGIGL DVHAFAASGT GLWLAGLHWP DEPALEGHSD GDVAAHAACD ALLSAAGLGD 
LGSNFGTARP EWAGAAGVAL LSEAAARVRA AGFVPGNVAV QVIGTRPKVG SRRAEAEAAL 
AEAAGCPVSV SATTTDGLGF TGRGEGLAAI ATALVLPAG