Gene Bcav_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0637 
Symbol 
ID7858438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp711918 
End bp713663 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content72% 
IMG OID643864717 
Productsodium/hydrogen exchanger 
Protein accessionYP_002880661 
Protein GI229819135 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTCG CGATCGTCGC CGTCCTCGGC ATCCTCGCCA TCGTCGCCGT CAACGCGCTC 
GCGCCGCGCG TCGGGGTCGC AGCACCGCTC GTCCTCATGC TGCTCGGCGT CGCGATCAGC
CTGCTGCCGT TCGTCCCTCT GGTCGAGGTC GAACCGGAGT GGATCCTCAT GGGCGTCCTG
CCGCCGCTGC TGTACTCGGC GTCCGTGTCC ATGCCGGCGA TGGACTTCCG GCGTGACTTC
CGGGCGATCT CCGGGCTCTC CGTGCTGCTC GTGGTCATCA CGGCCGTGCT GCTCGGCTGG
CTGTTCTCCG TGCTCATCCC GGACATCAAC CTCGCCACGG GCATCGCGCT CGGCGCGATC
GTCAGCCCCA CCGACGCCGT CGCGACGAGC ATCGTCAAGC GGCTCGGGGC GCCGACGCGC
GTCGTGACGA TCCTCGAGGG CGAGAGCCTG CTCAACGACG CCTCGGCCCT GGTTCTCCTG
CGGTCCGCGA TCGCGGCGAC GGCCACGGCG GTGTCGCTGT GGGGCGTCGT GGGCGACTTC
CTGTTCGCCG TCGTCGTGGC CGTGGCGATC GGCGGCGTCG TCGGCATCCT CAACCTGCGG
GCGCGCAAGG CGATCCGCCA GGCGACGCTC AACACGGCGA TCTCGTTCGT GGTCCCGTTC
GTCGCGTACG TCCCCGCCGA GGAGCTGGGC GCGTCAGGGC TGGTCGCGGC CGTCACGGCG
GGTCTCGTCA CCGGCTGGGG CAGCACCCGC TACCTGCGTC CGCAGGACCG CCTCGCCCAG
ACCGAGAACT GGCGCACCAT CGAGCTCGTC CTCGAGGGCG CGGTCTTCCT CGTCATGGGC
CTGGAGGTCG TCGACATCGT CACCGACGTC ACGGAGAGCC ACGGGAGCGT CGCGCTCGCC
GTCGGGATCG CGGCACTGAC GATCCTCGGG CTCGTCGTCA TCCGCGCGGC GTTCCTCGCA
CCGCTGCTGC GCTCGCTCGG CAGACGCGCC GATCGGGCCG CAACGGTCCG TGCGGCGATG
GCGGACAACC AGCAGCGGTG GGAGGACGCC GCCGCGGCCG ACCCCGAGCG GGTGCGCAAG
GTGGCGGAAC GCTTCGGGCA GGACGCGTAC GAGCGCCGTC GCGCGCGCTT CACGCTGGCA
TTCACACGGC GCATCGCCGA CGTCGACTAC CTGGCCTCAG CGCGCCTCGG GTGGCGCGAG
GGCGGCCTGC TCGTGTGGGC AGGGATGCGC GGCGTGGTCA CGCTCGCCGC GGCCCAGACG
CTGCCTCGCG ACACCCCGGC CCGGTCGCTG CTGGTGCTCG TGGCGTTCCT CGTGGCGGGG
GGTTCCCTGC TCGTCCAGGG CGGCACGCTG CCGTGGCTGG TCCGCCGGCT GGGGCTCACG
AGCACGGACA CCACGGAGAG CGACGACGAG CGGCAGCGCC TGCAGGTCGC CCTCGCCGAC
GCCGCTACCG GCGCGCTCGA CCGCCTGACG ACCGACGACG GCGGCACGTA CGACGCCGGG
GTCGTGGCGC AGGTGCGGCT CGAGTCGACC TTCGGCATCG GCGAGGAGAC CGAGGAGGAG
TCCGCCGGGC CTACCTCACG CTTCGCGCAG TACCGCAGCC TCCGGGTGAA GGTCATCGAG
GCGCAGCGTG CCGAGCTCCT CCACCTGCGC GCCGTCGGCA CCTACGACTC CACAGCCCTC
ACGCGCGCGC TCGAGGTTCT CGACGCCGAC CAGATCCGGC TCGAGCTCGA CGGCGAGCCC
GCGTAG
 
Protein sequence
MEFAIVAVLG ILAIVAVNAL APRVGVAAPL VLMLLGVAIS LLPFVPLVEV EPEWILMGVL 
PPLLYSASVS MPAMDFRRDF RAISGLSVLL VVITAVLLGW LFSVLIPDIN LATGIALGAI
VSPTDAVATS IVKRLGAPTR VVTILEGESL LNDASALVLL RSAIAATATA VSLWGVVGDF
LFAVVVAVAI GGVVGILNLR ARKAIRQATL NTAISFVVPF VAYVPAEELG ASGLVAAVTA
GLVTGWGSTR YLRPQDRLAQ TENWRTIELV LEGAVFLVMG LEVVDIVTDV TESHGSVALA
VGIAALTILG LVVIRAAFLA PLLRSLGRRA DRAATVRAAM ADNQQRWEDA AAADPERVRK
VAERFGQDAY ERRRARFTLA FTRRIADVDY LASARLGWRE GGLLVWAGMR GVVTLAAAQT
LPRDTPARSL LVLVAFLVAG GSLLVQGGTL PWLVRRLGLT STDTTESDDE RQRLQVALAD
AATGALDRLT TDDGGTYDAG VVAQVRLEST FGIGEETEEE SAGPTSRFAQ YRSLRVKVIE
AQRAELLHLR AVGTYDSTAL TRALEVLDAD QIRLELDGEP A