| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0572 |
|---|
| Symbol | |
|---|
| ID | 7861035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 633255 |
|---|
| End bp | 634667 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643864652 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002880597 |
|---|
| Protein GI | 229819071 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACG ATCCGACCGG TCTCGCCCGG TGGGGCGCGC TCGGCGTCGC GGCGGCGCTG
GTCCTCGCCG GATGCGGCGC GGGCGGCGGC GACGCCGGCG GCGGCGGCGA CGACACCGGT
GCCGAGCTCG AAGCCTCCGC CGAGGACTTC CTCGCTGGAC GTGGCGAGGA GCTCGGCGTC
GGCAGCATCA GCGTTCTCGC TCAGAGCTCA CCTCAGGCCG ACGCGATCCA GCAGATCAGC
GGACAGTTCA CCGAGCTCAC CGGGATCACC GTCGACTGGA CGATCCTCGA CGAGCAGTCC
ACCGAGAACC GCGCGGCAGT GGCACTCGGT TCGGGTGACG GCGGGTACGA CGTCCTGCAG
ACGCCGTCCG GCTTCATCCC GACGTACGTG GACCGCGGCT GGCTCGAGCC GATCGGGCCG
CTCGTCGACG ACGCGGAGAG CATCGTCCCC GGATGGGACC TCGCGGCGTT CGGCGAGGGG
ACGACGTCGC TGCTGAGCCG GGAGGACGAG CTGTACGGCG TCCCGATGTT CATCGGGACC
CAGATGTTCT ACTACCGCAC CGACGTGTTC GCCGAGCACG GCATCGACGC GGTGCCGACG
ACGTACGAGG AGCTCGTCGA CGTCGTCCAC CAGATCCACT CCGACGATGT CGCCGGCATC
GCGCTGCGGA CGGCCCCGAG CCCGTCGCAG CTGCTGTTCG TCTGGTCGGC GTGGCTCTAC
GCCAACGGCG GCAGCTACTA CGAGACGTTC GACGACGGCA CGTACTCGGG ATCTGCCCTG
GACTCCCCGG AGGCCGTCGA GTCGCTCACG ACGTACACCG ACCTCGTGCA GAACTACGCG
CCGTCCGGAG CGACGAACTG GAGCGTCGAC GACGTCACGC GCGCCTTCGC CAGCGGGCGG
GTCGCGATCG TCCAGGAGGG TGCCGTGTTC GGCGGCACCT TCAACAACCC GGAGGCCTCG
CAGGTCGCGG GGAACATCGA CTCGTTCACG CTGCCGGAGG GTCCCGCCGG CTCGTACGTG
CCGTACAACA CGCACGGGTG GACCATCGCG GCGAACAGCG ATGCGACGGA CGCGGCGTGG
CTCTTCACGC AGTGGGCGAC TCTCGCGCAG ACGCTCACGG CGGCGACACA GACGGACGCC
AACTTCGGGG CGCCGCCTCT CGCGGAGGTG TACGAGTCGC CGGAGTACGA GGAGAGCTAC
GGGTTCGGGA GCTTCGTCCC GACCGTCACC GGCACGATCG GGATCGCGAA CGACGGCGGC
GTCTCACCGT TCGAGGACGA TCCGAACTAC CTGCCGGCGA CACCGGACTG GGCGACCGTC
GGTCAGCAGA TCGCCGAGGA GCTGAGCAAG GCGGTGACGG GCCAGGTCGA GGTCGCCGAA
GCCATCCGGG CCGCCGCCGC GTACCTCGAG TGA
|
|---|
| Protein sequence | MRNDPTGLAR WGALGVAAAL VLAGCGAGGG DAGGGGDDTG AELEASAEDF LAGRGEELGV
GSISVLAQSS PQADAIQQIS GQFTELTGIT VDWTILDEQS TENRAAVALG SGDGGYDVLQ
TPSGFIPTYV DRGWLEPIGP LVDDAESIVP GWDLAAFGEG TTSLLSREDE LYGVPMFIGT
QMFYYRTDVF AEHGIDAVPT TYEELVDVVH QIHSDDVAGI ALRTAPSPSQ LLFVWSAWLY
ANGGSYYETF DDGTYSGSAL DSPEAVESLT TYTDLVQNYA PSGATNWSVD DVTRAFASGR
VAIVQEGAVF GGTFNNPEAS QVAGNIDSFT LPEGPAGSYV PYNTHGWTIA ANSDATDAAW
LFTQWATLAQ TLTAATQTDA NFGAPPLAEV YESPEYEESY GFGSFVPTVT GTIGIANDGG
VSPFEDDPNY LPATPDWATV GQQIAEELSK AVTGQVEVAE AIRAAAAYLE
|
|---|
| |