Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0568 |
Symbol | |
ID | 7857934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 629102 |
End bp | 629998 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643864648 |
Product | methylisocitrate lyase |
Protein accession | YP_002880593 |
Protein GI | 229819067 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCACG CGACGGCGAC CGCCCAGGAG AAGCGCGGCG CTCTGCGGTC GGCGCTCGCG GACGGCGACC GGCTGCTGCG CTGGCCCGGG GCGTTCAACC CGCTCGGCGC CCGCCTCATC GAGGACAAGG GGTTCGAGGG CGTCTACGTG TCCGGCGCTG TGCTCTCCGC CGATCTCGGG CTGCCCGACA TCGGCCTGAC GACGCTCACC GAGGTGGCCG GTCGGGCGGG GCAGATCGCG CGGATGACGA ACCTGCCGAC GCTCGTCGAC GCCGACACGG GCTTCGGTGA GCCGATGAAC GTCGCGCGCA CCGTCCAGGT GCTCGAGGAC GCCGGGCTGG CCGGGTGCCA CATCGAGGAC CAGGTGAACC CGAAGCGGTG CGGGCACCTC GACGGCAAGC AGGTGGTGCC GCTGGCCGAC GCCGTGCAGC GGGTCCGGGC GGCGGCCGAC GCACGGCGCG ACGGCGACTT CCTCGTGATG GCCCGCACGG ACGTGCGCGC CGTCGAAGGG TTCGACGCCG CGATCGAGCG GGCTCGCGCC TTCGTGGACG CGGGCGCCGA CGCGATCTTC CCCGAGGCGA TGCGCTCGCT GGCGGAGTTC GAGGCGGTGG CGAACGCCGT CGACGTCCCG GTGCTGGCGA ACATGACGGA GTTCGGGAAG TCCGAGCTGT TCACTGTCTC GCAGCTGCAG GACGCCGGCG TCCGGATCGT CATCTACCCG GTGACGCTGC TGCGGGTGGC GATGGGCGCC GTCGAGCGTG GGCTCGACGA GATCACCGCG GCCGGGACGC AGGCCGCGCT CGTGCCGGAC ATGCAGACGC GCGCGCGGCT GTACGAGCTG GTCGACTACG CCGGGTACAA CGCCTTCGAC GCGGAGATCT TCACGTATCG GCCGTGA
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Protein sequence | MLHATATAQE KRGALRSALA DGDRLLRWPG AFNPLGARLI EDKGFEGVYV SGAVLSADLG LPDIGLTTLT EVAGRAGQIA RMTNLPTLVD ADTGFGEPMN VARTVQVLED AGLAGCHIED QVNPKRCGHL DGKQVVPLAD AVQRVRAAAD ARRDGDFLVM ARTDVRAVEG FDAAIERARA FVDAGADAIF PEAMRSLAEF EAVANAVDVP VLANMTEFGK SELFTVSQLQ DAGVRIVIYP VTLLRVAMGA VERGLDEITA AGTQAALVPD MQTRARLYEL VDYAGYNAFD AEIFTYRP
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