Gene Bcav_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0568 
Symbol 
ID7857934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp629102 
End bp629998 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content72% 
IMG OID643864648 
Productmethylisocitrate lyase 
Protein accessionYP_002880593 
Protein GI229819067 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02317] methylisocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCACG CGACGGCGAC CGCCCAGGAG AAGCGCGGCG CTCTGCGGTC GGCGCTCGCG 
GACGGCGACC GGCTGCTGCG CTGGCCCGGG GCGTTCAACC CGCTCGGCGC CCGCCTCATC
GAGGACAAGG GGTTCGAGGG CGTCTACGTG TCCGGCGCTG TGCTCTCCGC CGATCTCGGG
CTGCCCGACA TCGGCCTGAC GACGCTCACC GAGGTGGCCG GTCGGGCGGG GCAGATCGCG
CGGATGACGA ACCTGCCGAC GCTCGTCGAC GCCGACACGG GCTTCGGTGA GCCGATGAAC
GTCGCGCGCA CCGTCCAGGT GCTCGAGGAC GCCGGGCTGG CCGGGTGCCA CATCGAGGAC
CAGGTGAACC CGAAGCGGTG CGGGCACCTC GACGGCAAGC AGGTGGTGCC GCTGGCCGAC
GCCGTGCAGC GGGTCCGGGC GGCGGCCGAC GCACGGCGCG ACGGCGACTT CCTCGTGATG
GCCCGCACGG ACGTGCGCGC CGTCGAAGGG TTCGACGCCG CGATCGAGCG GGCTCGCGCC
TTCGTGGACG CGGGCGCCGA CGCGATCTTC CCCGAGGCGA TGCGCTCGCT GGCGGAGTTC
GAGGCGGTGG CGAACGCCGT CGACGTCCCG GTGCTGGCGA ACATGACGGA GTTCGGGAAG
TCCGAGCTGT TCACTGTCTC GCAGCTGCAG GACGCCGGCG TCCGGATCGT CATCTACCCG
GTGACGCTGC TGCGGGTGGC GATGGGCGCC GTCGAGCGTG GGCTCGACGA GATCACCGCG
GCCGGGACGC AGGCCGCGCT CGTGCCGGAC ATGCAGACGC GCGCGCGGCT GTACGAGCTG
GTCGACTACG CCGGGTACAA CGCCTTCGAC GCGGAGATCT TCACGTATCG GCCGTGA
 
Protein sequence
MLHATATAQE KRGALRSALA DGDRLLRWPG AFNPLGARLI EDKGFEGVYV SGAVLSADLG 
LPDIGLTTLT EVAGRAGQIA RMTNLPTLVD ADTGFGEPMN VARTVQVLED AGLAGCHIED
QVNPKRCGHL DGKQVVPLAD AVQRVRAAAD ARRDGDFLVM ARTDVRAVEG FDAAIERARA
FVDAGADAIF PEAMRSLAEF EAVANAVDVP VLANMTEFGK SELFTVSQLQ DAGVRIVIYP
VTLLRVAMGA VERGLDEITA AGTQAALVPD MQTRARLYEL VDYAGYNAFD AEIFTYRP