Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0554 |
Symbol | |
ID | 7857920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 610685 |
End bp | 611575 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643864634 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002880579 |
Protein GI | 229819053 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0552972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC TCACGACTCC TCGACTGGGC GACCCGACCC AGGAACGCGT CGACCGCCAC GCGCGGCAGC GCAACCTCGT GGCGAGGCTG GTGACGCAGG TCTGCCTGTG GATCGGCGTC CTGATGTCGA TCTTCCCGTT CTACTGGCTC ATCACGATGT CGACGAACAC CACGGCAGAG ATCTTCGGCT TCCCGCCGAA GCTCACGTTC GGCACGAACT TCGCCGAGAA CATGCGCAAC CTCCTGGCGA GCGTCGACCT GTTCCAGGCC CTGCTGAACA CGATCCTCGT CGCCGGCGCG CTCGCCGTCC TGGTCATGTT CTTCGACTCG CTGGCGGCGT TCACGTTCGC GAAGTACTCG TTCCCGGGCA AGAACGTGCT GTTCACGCTG CTGATCGCGA CGTTCCTCGT CCCGGGCAGC CTCTCCCTGG TGCCGAGCTT CGTGCTCATG TCCTGGTTCG GCTGGATCGG CGGCCTGCAG GCGCTCATCA TCCCCGGGGC GGCGAACGCC TTCGGCATCT TCCTGCTGCG CCAGTTCGCC ACGAACTCGA TCCCGGACGA GCTGTTGGAG TCCGCTCGGA TCGACGGCGC CGGGTTCTTC CGGTGCTACC GGTCGATCGG CGTTCCGATG CTCCGGGGCG GCCTGGCGTT CCTCGGGATC TTCACGTTCA TCGGCGCGTG GAACGACTAC ATCTGGCCCC TGGTCGTGCT CATCGACCCG CAACGGCAGA CCCTCCAGGT GGCGCTCCAG ACGCTGAACT CCATCTACCT CACCGACTAC GGGATGGTCA TGGCGGGAGC GCTGATCAGC GTGCTGCCGC TCATCGGGGT GTTCATCATC GGGCAGCGGC ACTTCATCGC GAACATCGCG GCTGGGGCCC TCAAGGGCTG A
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Protein sequence | MSALTTPRLG DPTQERVDRH ARQRNLVARL VTQVCLWIGV LMSIFPFYWL ITMSTNTTAE IFGFPPKLTF GTNFAENMRN LLASVDLFQA LLNTILVAGA LAVLVMFFDS LAAFTFAKYS FPGKNVLFTL LIATFLVPGS LSLVPSFVLM SWFGWIGGLQ ALIIPGAANA FGIFLLRQFA TNSIPDELLE SARIDGAGFF RCYRSIGVPM LRGGLAFLGI FTFIGAWNDY IWPLVVLIDP QRQTLQVALQ TLNSIYLTDY GMVMAGALIS VLPLIGVFII GQRHFIANIA AGALKG
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