Gene Bcav_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0486 
Symbol 
ID7861870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp541133 
End bp541501 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content69% 
IMG OID643864564 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002880511 
Protein GI229818985 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.78271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACG GCCCTGAGCC CATCTACGTG CAGATCGCCG ACATGGTCCG CGCGCAGATC 
CTCGCCGGCT CCCTCGGGGA GGAGGAGCAG GTCATGTCCA CCACACAGTT CTCGACGACG
TTCCGCATCA ACCCCGCGAC CGTCGCCAAG GCGTACGCGC AGCTGGTCGA CGAGGGGCTC
ATCTACAAGC GCCGCGGCCT CGGCATGTTC GTCACGGTCG GCGCCCGCGA GAAGCTCCTC
GCCGCTCACC GCGCGGCGTT CTTCGGCGAG GTCCTCGACC CGGCCCTCAC CCAGGCCGAC
CTGCTCGGGA TCTCCCGGGA CGCCGTCGTC GCCCACATCC TCGGCACCAG CACCACGGAG
AAGCCATGA
 
Protein sequence
MFDGPEPIYV QIADMVRAQI LAGSLGEEEQ VMSTTQFSTT FRINPATVAK AYAQLVDEGL 
IYKRRGLGMF VTVGAREKLL AAHRAAFFGE VLDPALTQAD LLGISRDAVV AHILGTSTTE
KP