Gene Bcav_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0475 
Symbol 
ID7861859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp531697 
End bp532722 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content76% 
IMG OID643864553 
Producthypothetical protein 
Protein accessionYP_002880500 
Protein GI229818974 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTCGCG CGTTCGCTCC CGGTCAGACC GCCACCGTGT GGATCCACGA CGTCGAGACG 
CGGGAGCGGC ACCGCGCCTG GGTCTCCCGC GACGTCCTGC CGGAGGCCCC GAACTGGACG
CCGGACGGCG CTCACCTCGT GCTCAACGGC GGCGGGCGGC TGTTGGTGAT CGACGCCGAG
CGAGCCGTCG CGCCGGAGTC CGTGACGCCG TCGCCCGTCG ACGCCGCTGG GCTACCGCCG
GTGAACAACG ACCACGTGCT CGCGCCCGAC GGGCGGACGG TGTTCGCCTC CGCGGAGGAC
GGGCACCTGT ACGCGGTGCC CCTCGCGGGC GGGTCCGCGC GCCGGGTCTC CTCCTCGCGC
GGGCCGACGT TCACGCACTA CCTGCACGGC GTCTCGTCCG ACGGCGCGAC GCTGAGCTAC
GTCGGGCTGG AGCGCCGCGC CGACGGCGTC CGCACGAACC TGTTCACGAT GCCTGCCGCG
GGCGGGCCGA GCGTGCAGCT CACCGACGAC GACTTCCCGG ACGACGGCGC CGAGCTCGGT
CCCGGCGAGG ACGGCACCGA GTGGCTGTGG TTCAGCTCCG AGCGGCCGCT GCCCGGCGCG
CCACGCCGGG CGCCGGGCCA CGCGCAGCTG TTCCGGATGC GCCCGGACGG CACGGGTCTC
GAGCAGCTCA CGCACGACGA GCGCGTGAAC TGGTTCCCGC ACCCGTCGCC GGGCGGCACC
CGCGTGGCGT ACGTGAGCTT CCCGCCCGGC ACGCTCGGGC ACCCCGCCGA CGTCGCGGAC
GTGCGGATCC GGCTCCTCCC GCTGAGCGGG CGCGCGCCGT CGGGCGCTGA CGGGGAACTG
GGGTCGATTC GGGAGGGTAT GGCTCCCGAA TCGACCCCGG TCCGGCCGCC CGGAGGGGTG
GATGACGACG GCGTCGGCCG TCCCCGCGAC CTGGCGCGCG TGTTCGGCGG CCAGGGCGCG
ATGAACGTGC CGAGCTGGGC GCCGGACTCG CGGCGGCTCG CGTACGTCGA CTACTCGCCC
GTCTGA
 
Protein sequence
MPRAFAPGQT ATVWIHDVET RERHRAWVSR DVLPEAPNWT PDGAHLVLNG GGRLLVIDAE 
RAVAPESVTP SPVDAAGLPP VNNDHVLAPD GRTVFASAED GHLYAVPLAG GSARRVSSSR
GPTFTHYLHG VSSDGATLSY VGLERRADGV RTNLFTMPAA GGPSVQLTDD DFPDDGAELG
PGEDGTEWLW FSSERPLPGA PRRAPGHAQL FRMRPDGTGL EQLTHDERVN WFPHPSPGGT
RVAYVSFPPG TLGHPADVAD VRIRLLPLSG RAPSGADGEL GSIREGMAPE STPVRPPGGV
DDDGVGRPRD LARVFGGQGA MNVPSWAPDS RRLAYVDYSP V