Gene Bcav_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0467 
Symbol 
ID7860727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp521239 
End bp522210 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content74% 
IMG OID643864545 
Producthypothetical protein 
Protein accessionYP_002880492 
Protein GI229818966 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0878073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.183079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG AACTCGACGA ACGACCCGAC GTCCTCGGCT CGGAGTGGGT GGCGCGGACG 
CTGCCGCTGG CACCGGACGA GGCGGACCCG GAGGGCGAGC TCGTGGCGAC GCTGGTACGG
AAGGCCGGGC CGCCGTCGTC GTCCACCGCG GTGCTCTACG TGCACGGCTT CACCGACTAC
TTCTTCCAGG ACCACCACGC GCGCGCCTGG GCGGGGCACG GCATCGACTT CTACGCGCTC
GACCTGCGGC GGTACGGACG CTCGCTGCGC GCCCACCACG CGGCCGGCGA CGTGCGCGAC
CTCCGCGCCT ACGACGAGGA GATCTCCGCG GCGATCTCGG TGCTCCGAGC GGAGCGCGGG
CACGAACGGG TCATCCTGCT CGGCCACTCG ACGGGCGGCC TCATCCTCAG CCTGTACGCG
CACGCCCACC CGCGGGCGGC CGACGCCCTC GTGCTGAACA GCCCGTGGTT CGACCTCAAC
GAGGCGGCGC TGCGGCGCAT GATCGCGACG CCGCTGGCCG AGAGCATCTC GCGGCTCGAT
CCGACTCGGC GCGTGGGCAA GCTGGGCGGG GCCTACGGGC GCTCGCTACA CACCAGCACG
GGCGGCTCGT GGGAGTACGA CCTTGCCTGG AAGCCGATCG AGGGCTTCCC GGTGCGGGCG
GGGTGGCTGC GCGCGATCCG CCGCGCTCAG GCTCGGGTCG CGCGCGGCCT CGACGTCCGG
ATCCCGGTAC TCGTGTGCTC GTCCACCCGT TCGGGCGGCG TCGCGGGCCG GCCGGCCACT
CCCGAGGAGC TCGCCTCGAC CGACACCGTC CTCGACGTGC AGCACATGTG GCGCGGCGCG
CAGGGCCTCG GGGACGACGT CACGATCGTC GCCGTCCCCG GTGGCCTGCA CGACCTCACG
CTCTCGGCGC CGCGCGCCCG CGCGGACTTC GAGCGCGCGG TCTTCACGTG GTTGAGCGCG
CGCCTGCCGT GA
 
Protein sequence
MSTELDERPD VLGSEWVART LPLAPDEADP EGELVATLVR KAGPPSSSTA VLYVHGFTDY 
FFQDHHARAW AGHGIDFYAL DLRRYGRSLR AHHAAGDVRD LRAYDEEISA AISVLRAERG
HERVILLGHS TGGLILSLYA HAHPRAADAL VLNSPWFDLN EAALRRMIAT PLAESISRLD
PTRRVGKLGG AYGRSLHTST GGSWEYDLAW KPIEGFPVRA GWLRAIRRAQ ARVARGLDVR
IPVLVCSSTR SGGVAGRPAT PEELASTDTV LDVQHMWRGA QGLGDDVTIV AVPGGLHDLT
LSAPRARADF ERAVFTWLSA RLP