| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0399 |
|---|
| Symbol | |
|---|
| ID | 7860657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 451328 |
|---|
| End bp | 452230 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643864476 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002880425 |
|---|
| Protein GI | 229818899 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.552724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCA CGGAACGACT GGCCCGACGC TTCGAGGAGG ACCGGCCGCA CCTGCGCGCC
GTCGCGTACC GCCTCCTCGG ATCCGCCGCC GAGGCCGACG ATGCCGTACA GGAGGCGTGG
CTGCGACTCA GCAGATCGGA CACGAGCGAC GTCGCCAACC TCACGGGGTG GCTGACGACG
GTCGTCGGGC GGATCTCGCT CGACATGCTG CGCTCCCGCA CGTCGCGCCG CGAGGCTCCG
CTCGAGGCCG AGCGCTCGGA CGCCGTCGAC CACGCCGCGC CCGACCCGGA GGCCGCGGCC
GTGCAGGCGG ACGCCGTCGG CACGGCCCTC CTCGTGGTCC TGGACCAGCT CGCACCCGCG
GAACGGCTGG CGTTCGTGCT GCACGACCTG TTCGGCGTGC CGTTCGAGGA CATCGGGCCG
ATCGTCGGGC GGTCGACGAC GGCGTCCCGT CAGCTCGCGA GCCGCGCGCG GCGGCGGGTG
CGTGGGGCCG GCGACGACGC CGGCGCCGAA CCGGACCCGG CCCGCCAGCG TCAGGTGGTC
GAGGCGTTCC TCGCGGCCTC GCGCGAGGGC GACTTCGCCG GGCTCCTGGC CCTGCTCGAC
CCGGACGTCG TGCTGACCGC CGACCGGGCC GCCGTCGCCG CCGCGACCGT CAACGCGGCG
AAGGGGGCCC CGGAGCTCGC TCCCGAGGTG CGCGGTGCTG GCGCCGTCGC GGAGGCGTTC
GCCGGGCGCG CGGCGTACGC GACGACGGCG CTCGTCGACG GCGCGTGGGG CGCCGTGTGG
GCCTCGGACG GCGCAGCGCG GGCGGTGTTC GCGTTCACGG TAGAGCGGGG ACGCATCGTG
GGCATCGACC TCGTGCTGAA CCAGACCACC GTGCGCGAGA TGGACGTCCA GCTCGTGCCG
TAG
|
|---|
| Protein sequence | MDRTERLARR FEEDRPHLRA VAYRLLGSAA EADDAVQEAW LRLSRSDTSD VANLTGWLTT
VVGRISLDML RSRTSRREAP LEAERSDAVD HAAPDPEAAA VQADAVGTAL LVVLDQLAPA
ERLAFVLHDL FGVPFEDIGP IVGRSTTASR QLASRARRRV RGAGDDAGAE PDPARQRQVV
EAFLAASREG DFAGLLALLD PDVVLTADRA AVAAATVNAA KGAPELAPEV RGAGAVAEAF
AGRAAYATTA LVDGAWGAVW ASDGAARAVF AFTVERGRIV GIDLVLNQTT VREMDVQLVP
|
|---|
| |