| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0396 |
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| Symbol | |
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| ID | 7860653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 448657 |
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| End bp | 449613 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 643864472 |
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| Product | RNA polymerase sigma factor SigJ |
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| Protein accession | YP_002880422 |
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| Protein GI | 229818896 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.766224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG GGACCGCCGA GCTCGCCGAC GCCTTCGAGG CCGAGCGTCC CCGGCTGCTG
CGCGTCGCGT ACCGGCTGAC GGGCAGCGTC GCCGACGCCG AGGACGCCGT GCAGGAGGCC
TGGCTGCGCC TCGACCGGGC GGAGTCCGCA GCGATCCGCG ACCTGCCCGC CTGGCTCACG
ACGGTCGTCA GCCGCATCTG CCTCGACCGG CTCACGTCGG CCGCCGCCCG CCGCGAGACA
TACGTCGGGA ACTGGCTGCC CGAGCCGGTC GTGACGGCGT TCCCGACCCC CGGGCACGCG
AGCGCCGCGC CGGACCCCCT GGACGCCGTC GTCGCCGACG CCGACGCGCG GTACGCCGCC
CTCGTCATCC TCGAGGCGCT CCCGCCGAAC CAGCGCGTCG CGTTCGTGCT GCACGACGGC
TTCGGCGTGC CCTTCGCCGA CGTCGCCGAC GTGCTCGGGA CGTCCCCCGC GAACGCGCGC
CAGCTCGCGG CGCGCGCCCG TGCCGGCGTG GCCGACCCAC CTCCGGCGTC GGACGCCGAG
ACGCGCCTGC GCGCCGTCGA GCAGCTCGCC GCCGCCCTCT CGGCCGGCGA CCTGGACGCG
ATCGTCGCCG TCCTGCACCC GGACGTCGTC GCCCGCGGGG ACTCCGGCGG CACGACGGCG
ACGGCGCTGC ACGCGGTGCG CGGCTCCGAC AAGGTCGCCC GCTTCTTCCT CGGGCTCCTC
GACAAGTACG GCACGCACGT CATCACGACG GCGCGGCCCG TGCTCGTCAA CGGCGAGCTC
GGCTTCCTGC TCGCGGGCTC GCCCGGCGAC GCCACGCACG ACCCGATCCC GCCCCGCGTC
ATGGCGCTCG GCGTGCGCGA CGGCCGCATC GCTGAGCTGT ACGACCTGGC GAACCCCGCG
AAGCTGCGCC ACGTCCGGCT GCCCGACGGC ACGCGCCCCG TGCCGGAGGC GGACTGA
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| Protein sequence | MSVGTAELAD AFEAERPRLL RVAYRLTGSV ADAEDAVQEA WLRLDRAESA AIRDLPAWLT
TVVSRICLDR LTSAAARRET YVGNWLPEPV VTAFPTPGHA SAAPDPLDAV VADADARYAA
LVILEALPPN QRVAFVLHDG FGVPFADVAD VLGTSPANAR QLAARARAGV ADPPPASDAE
TRLRAVEQLA AALSAGDLDA IVAVLHPDVV ARGDSGGTTA TALHAVRGSD KVARFFLGLL
DKYGTHVITT ARPVLVNGEL GFLLAGSPGD ATHDPIPPRV MALGVRDGRI AELYDLANPA
KLRHVRLPDG TRPVPEAD
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