Gene Bcav_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0378 
Symbol 
ID7859071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp423268 
End bp424392 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content75% 
IMG OID643864454 
Productdiacylglycerol kinase catalytic region 
Protein accessionYP_002880404 
Protein GI229818878 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.727774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.4677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGG AGCAGATCGT CGCGCTCGCG GCGATCGTGC TGGCCCTCGC CGCGATCGTC 
GTCGGGGTGC TCGCGCTGCG CCGCCTGCGC GCCGCCGGCG ACGCCCCGGG TCCGGCGCCA
CGGGCCGAGA ACCCGCGCGC CGACATCGGG CCGGCGGCGT TCGTCATCAA CCCGGTCAAG
GTCGACGACC CGGCGCGCAT CGAGCACGCG GCGCGCACCA TCAGCGCGGA GCTCGGCATG
CCGGAGCCGT TGCTGTACCG CACCACCGTC GAGGACCCGG GTGTCGGGCA GGCGCGGGCG
GCGCTCGACG CCGGAGCGTC GGTCGTCGTC GCGGCCGGCG GCGACGGAAC CGTCCGCGCC
GTCGCGACGG CGCTCGCGGG GACCGGCACG CCCATGGGGC TGCTCCCCTC CGGGACGGGG
AACCTGCTGG CCCGGAACCT GGACCTGCCC GTCGACGGCG CCGACGCGCT CATCCGCACG
GCGCTGGCCG GGCGCGACGT GCCGGTGGAC CTCGGTTGGC TGACGCCCGT GCGGCTGCGG
ACGCCGGACG AGGAGGACGA CGACGCCGAC GCTCCCGACG TGCTCACGGA CCGCGAGGAG
CACCTGTTCC TCGTCATGGC GGGGATCGGG TTCGACGCCG CGATGGTGGC CGGGGCCGAC
GACGACCTCA AGGCCCGGAT GGGCTGGATG GCCTACTTCC TGGCGGGGGT CCGGCACCTG
CACGGGCGCA AGATCCGGTT GGAGATGAGG ATCGGCGACG CCGAGCCGCG CCAGCTGAAG
CTGCGGTCGC TGCTGTTCGC GAACTGCGGG CGCCTGCCCG GCGGGATCGT GCTCCTCCCG
GATGCGGAGA TCGACGACGG GCTTCTCGAC GTCGCCGCGA TCGACACCCG CGGCGGACTC
ATCGGCTGGG CGTCGCTGTT CGGGAAGGTG GTGCTGCAGG GGGTCGGGGT GCGCGGGCAG
CTCGCGGCGA GCCCGGGGCG CATCGACTTC TTCCGCGGCG CCGACATCGA GGTGCGCATG
GACCAGGCCG AGCAGGTGCA GGTCGACGGC GATCTGCTGG GCGAGGCGAT CGGCGTCCGG
ACCCGCGTGC AGCCCGGCGG GCTCAGGGTC CGCGTCCGCG GCTGA
 
Protein sequence
MAWEQIVALA AIVLALAAIV VGVLALRRLR AAGDAPGPAP RAENPRADIG PAAFVINPVK 
VDDPARIEHA ARTISAELGM PEPLLYRTTV EDPGVGQARA ALDAGASVVV AAGGDGTVRA
VATALAGTGT PMGLLPSGTG NLLARNLDLP VDGADALIRT ALAGRDVPVD LGWLTPVRLR
TPDEEDDDAD APDVLTDREE HLFLVMAGIG FDAAMVAGAD DDLKARMGWM AYFLAGVRHL
HGRKIRLEMR IGDAEPRQLK LRSLLFANCG RLPGGIVLLP DAEIDDGLLD VAAIDTRGGL
IGWASLFGKV VLQGVGVRGQ LAASPGRIDF FRGADIEVRM DQAEQVQVDG DLLGEAIGVR
TRVQPGGLRV RVRG