Gene Bcav_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0329 
Symbol 
ID7859021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp352726 
End bp353853 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content75% 
IMG OID643864405 
Productaromatic amino acid beta-eliminating lyase/threonine aldolase 
Protein accessionYP_002880355 
Protein GI229818829 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGTC GTCGTCCGCC GCCCTACACT CCACCGCCCT ACGCTGTCGC CGTGCCCGTT 
GCGCCCGTCT CGTTCGCGTC CGACAACTAC GCCCCGGCGC ACCCGGAGGT GCTCGCGGCG
CTGACGGAGG CGAACTCCGG GCACGCCGTC TCCTACGGCG AGGACCCGTG GACCGAGCGA
CTGGCCGACG TCGTCCGCCG CCACTTCGGG GAGCACGCGC TCGCGTACCC GGTGCTCACG
GGGACGGGCG CGAACGTCGT CGCCCTCGCG TCGGTGCTCC CGCGGTGGGG CGGGGTGCTC
GTCAGCCGGC ACGCACACCT GCACACGGAC GAGGCCGGAG CGCCCGAGCA GGTCGCGGGC
ATCAAGCTTC TCCCGGTCGC GGCACCGGAC GGGCGGATCG CGCCGTCCGA CGTCGAGCGG
GCCGCCGTCG ACCTGGCGGA CGTCCACCGG GCCCAGCCGC TCGCCGTGTC GCTCACGCAG
GCGACCGAGC TCGGCACCGT GTACGAGCCG GAGGCGCTCC GCGCGATCGC CGACGCCGCG
CACGCCCGCG GGATGCGGGT GCACGTCGAC GGCGCCCGGC TGGCGAACGC CGCGGCGCAC
CTCGGCGTCG GCCTGCGTGA GCTGACGACG GACGCCGGGG TCGACGTCGT GTCGTTCGGC
GGGACGAAGA ACGGGCTGCT GCTGGGAGAG ATGGTGGTCG TGTGCGCGCC GGACGCCGTC
GCCGGCCTGG AGAACCTCCG CAAGCAGGCG ATGCAGCTCG CGTCGAAGAT GCGGTACGTC
TCGGCGCAGC TCGTCGCCCT GCTCGACGGC GACCTGTGGC TGCGTTCGGC ACGGCACGCC
AACGAGATGG CCGCCCTGCT GCGCACGACC CTCGACGACG CCGTCGCCTC CGGGCGAGCG
CCCGGCCTCG CGTTCACGCA GCCGACGCAG GCGAACTCCC TCTTCGCGAC GCTGCCTCCC
GGCGTCGCCG ACCGCCTGCG CGCCCGGTTC CGCTTCTACG ACTGGGACGC CGCGCGCCGG
GAGGTGCGCT GGATGTGCGC GTGGGACACG ACGCCGGGTG ACGTCGAAGG GTTCGCGGCC
GCTGTCGTGG CGGAGCTCGG AGCCGCGGGG AGCGCGGCGT CCACCTGA
 
Protein sequence
MRRRRPPPYT PPPYAVAVPV APVSFASDNY APAHPEVLAA LTEANSGHAV SYGEDPWTER 
LADVVRRHFG EHALAYPVLT GTGANVVALA SVLPRWGGVL VSRHAHLHTD EAGAPEQVAG
IKLLPVAAPD GRIAPSDVER AAVDLADVHR AQPLAVSLTQ ATELGTVYEP EALRAIADAA
HARGMRVHVD GARLANAAAH LGVGLRELTT DAGVDVVSFG GTKNGLLLGE MVVVCAPDAV
AGLENLRKQA MQLASKMRYV SAQLVALLDG DLWLRSARHA NEMAALLRTT LDDAVASGRA
PGLAFTQPTQ ANSLFATLPP GVADRLRARF RFYDWDAARR EVRWMCAWDT TPGDVEGFAA
AVVAELGAAG SAAST