Gene Bcav_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0309 
Symbol 
ID7859001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp332031 
End bp333071 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content76% 
IMG OID643864385 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002880335 
Protein GI229818809 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA CGATCTACGA GATCGCGCGG CGCGCCGGCG TCGGCGTCTC CACGGTGTCG 
CGGTACCTCA ACTCGTCCGG CTACGTCGGT GCCGACGCCG CCCGGCGCAT CGCCGCCGTC
GTCGAGGAGA CGGGCTACGT CTCGAGCCGC GCCGCCAGCT CACTGACGAC CAAGCGCAGC
GGCGCCATCG GGTTCGTCAC GTCGAGCCTC CTCAACCCGT TCGCCGCGGA GCTCGCCCAC
GCGATGGCCG CGGAGGCCGC CAGCGAGGGG TTCTCCGTGC TGTCGGCGGT CACGGACGGC
GACGACGACC GCCTCGTCCA CGTGCTGCGC GACCTGCGCA GCCACCGCGT CGACGGCGTC
ATCGTCACGC CGCCGGAGAC CCCTGCCGTC CGCGAGGAGC TGGCCCGGAC CGTGGCGTCC
GGGGTGCCGG TCACGACCAT CGGGATGGCG ATCCCGGACG CCGCCCACGA CGAGGTCAGC
ACGGACACGT ACGGCGGGGC GCTCGACGCC GTCCGGCACC TCCTCGAGCA GGGTCACCGC
GCGATCGCCG TCGTGGCCGG CCCCGATCCG GAGCGCGTCG CCGCAAGCCG GTTCCGCGCC
TACCGGGACG CCCTCGACGC CGCCGGCCTC GCCGTCCGCG CCGAGCTGGT GCCCGCCACG
GCGCTCGACC GTGAGGGCGG GGCCGAGGCC GCGGCGCGCC TCTTCGCCCT CGACGCACCC
CCGACGGCGG TGTTCGCCGC GAACGACCTG GCGGCGCTCG GCGTCCTCCA GGCCGCCCAC
GAGGCGGGAC TGCGCGTGCC CGACGACCTG TCCGTCGTCG GCTTCGACGA CATCGCGATG
GCCTCCCACG CCACCCCGCC CCTCACCACG GTGCGGCAGC CCAAGACCGC GATGGGGGTC
CGCGCCGTCC GGCTGCTGCT CGACCGGATC GCCGAGCCCG AGCGCGAACC ACGTTCCGAA
CGGCTGGAGT GCGAGCTGGT GGTGCGCGCC TCGGTGGCCC CGCCGCGCCG TGGCCGGGAA
GGAGCCGCCA CCGACCTCTG A
 
Protein sequence
MAVTIYEIAR RAGVGVSTVS RYLNSSGYVG ADAARRIAAV VEETGYVSSR AASSLTTKRS 
GAIGFVTSSL LNPFAAELAH AMAAEAASEG FSVLSAVTDG DDDRLVHVLR DLRSHRVDGV
IVTPPETPAV REELARTVAS GVPVTTIGMA IPDAAHDEVS TDTYGGALDA VRHLLEQGHR
AIAVVAGPDP ERVAASRFRA YRDALDAAGL AVRAELVPAT ALDREGGAEA AARLFALDAP
PTAVFAANDL AALGVLQAAH EAGLRVPDDL SVVGFDDIAM ASHATPPLTT VRQPKTAMGV
RAVRLLLDRI AEPEREPRSE RLECELVVRA SVAPPRRGRE GAATDL