Gene Bcav_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0287 
Symbol 
ID7858979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp308915 
End bp310027 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content74% 
IMG OID643864364 
Producthistidine kinase dimerisation and phosphoacceptor region 
Protein accessionYP_002880314 
Protein GI229818788 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.260696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.144944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACG CCGGGCGCAG CCGCGCCTGG CGGTTCCTCG GCCCGCTGCT CGCGATCGTG 
TGGGTCGCGT TCCTCGCCGA GCCACTCAGC GCGGCCCTCG CCGCCGACGA CCTGTGGGTC
CGCGTCGTCT CTGTGGTCGG CGTCGTCGGC GTCGGGATCA CGTTCGCGTT CTCGATGCTG
TTCGTGCGCA GAGAGCAACA GTCGCCGAGC ATGATCGTCC TGCTCGTCGC GCTCGAGCTG
TTCTTCACAG CGATCTCGTG CCTCGGGGCG CACGAGCACG GGCTCGTCGG CCTCGTGTAC
GTCAGCGCGA CTGTGCACGT CCTCACCCGC TCCCCGCGCG CGTTCGTGAC GACGATCCTG
TGCGCGGCGG CCGCTTTCGT GCTGCCGCGG GTCATCCCCG GCTGGGACCC GGCAGACGGG
ACCGTCGCCG CCGTCGTCCT GGCCAGCCTC GCCACGTTCG GTTTCACCCA GCTGATCCGC
CGCAACCGCC AGCTCCTCGC CGCCCAGCGG GAGATCGCCG AGCTCGCGGC GGCGCGGGAA
CGTGCCCGCC TCGCGCGCGA CGTGCACGAC CTCGTCGGCC ACTCGCTCAC CGTCGTCGCC
GTCAAGGCGG AGCTGGCCAG GCGGCTCGTG TCCCGGGACC CGGACGCCGC AACCGGAGAG
CTCGCCGACA TCCACGAGCT CGCCCGCTCC GCGCTCGCCG ACGTCCGCTC CATGGTCCAG
GCCACGCGCG GTGTCACGCT CCCCGGGGAG CTCGTGGCGG CACGGCAGGC GCTCGACGCT
GCCGGGATCG AGGCGCAGCT ACCCGGCGCG GTCGACGTCG TCCCGGATCC TCTGCGCGAA
CCGTTCGCGT GGGTGGTGCG CGAGGGCGTG ACGAACGTGC TGCGGCACGC CGGGGCGTCC
CGCGTGGTCG TCACCCTGGC CGCTGACCGA CTCGTGGTGG AGGACGACGG ACGCGGCCCC
GGGCCAGACA GTGGCGCCGC GGGCGCGCCC GCCCCTGGGC AGGGCATCGC CGGGCTCACG
GAACGCCTGC GCGCCGTGGG CGCCACCCTG GAGACCGGCA CGTCGAGCCT GGGCGGGTTC
CGGCTCGCGG CGCGTGCCGG CGGTGCGGCA TGA
 
Protein sequence
MSHAGRSRAW RFLGPLLAIV WVAFLAEPLS AALAADDLWV RVVSVVGVVG VGITFAFSML 
FVRREQQSPS MIVLLVALEL FFTAISCLGA HEHGLVGLVY VSATVHVLTR SPRAFVTTIL
CAAAAFVLPR VIPGWDPADG TVAAVVLASL ATFGFTQLIR RNRQLLAAQR EIAELAAARE
RARLARDVHD LVGHSLTVVA VKAELARRLV SRDPDAATGE LADIHELARS ALADVRSMVQ
ATRGVTLPGE LVAARQALDA AGIEAQLPGA VDVVPDPLRE PFAWVVREGV TNVLRHAGAS
RVVVTLAADR LVVEDDGRGP GPDSGAAGAP APGQGIAGLT ERLRAVGATL ETGTSSLGGF
RLAARAGGAA