Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0280 |
Symbol | |
ID | 7858971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 303685 |
End bp | 304725 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643864357 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002880307 |
Protein GI | 229818781 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.923594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0520546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGTGA CCCGGGCGGA CGTCGCCGCG ATGGCGGGGG TCTCGCCCGC GCTCGTCTCC TACGTCATCA ACGGCGGACC GCGGCCGGTC TCGGACCAGG CACGGCGGCG CGTCGAGGCG GCGATCGAGG CGCTCGGCTA CCGGCCGAAC GCCATCGCGT CGGCGCTGCG CGGCGGCATG ACGCGGTCGA TCGGGCTGCT GACGCCGAGC CCGGTGAACC CCTTCTTCGC GGAGATGGCC GAGGCGCTCG TGCTCGAGCT GTTCCAGCGC GGCAACACGC TCTCGATCGG CATCACCGAC GACGACCCCG CGCGCGAGAC GCTCTACCTG CGCTCGTTCC TCGACCGCCG GGTGGACGGG CTCATCGTCA CGTCGTCGCG TGCGATGACC TCGTTGCAGA GGCTGCACGC CGACCCGGTT CCCGCCGTCG TCATCGACCG CGTGGACGAC CTCGGCGTCG CCGGCGGCCC ATCCAGCGTG CACGTCGACA ACCTGCACGC CGCGACGTAC GCCGTCGAGC ACCTGCAGGC GCACGGACAT CGCGTGATCG GCTGCATCGC CGGGCCGTGG CCGGTGGCGC TCTCCGCCGA GCGCATCGCC GGGTGGCGCG CGCAGCAGGA GCGGATCGGG GCAGACGCGT CCGACGCCCT CGTGGAGCAT GCGGAGTTCT CCGAGTCCGG AGGCCGGGAG GCGGCGCTCG CGCTCCTCGG CCCGGAGGCG CGCCGTCGGT CTGCCCGGGC GTCCGGCCCG ACGGCCCTGT TCGTGGCGTC GGACGTGCAG GCGTTCGGCG CGATCGTCGC GTGCGCGGAG CTCGGGCTGC GGGTGCCCGA CGACGTCGCG ATCGTCTCCC TGGACGGCAC CGCGACGGCG CGGTTCTCCC GCCCGCCGCT GACGAGCGTG CGCCAGCCGG TGGTCGACAT GGTGCGGGCC GCCGTCGGGC ACCTGCTCGA CCACATCGCC GACCCCGAGC TGGCGCCCGC GCACACCGTG CTGCGGGGGA ACCTCGTGGT AGGGCGCAGC TGCGGCTGCG GGGAGCGGTG A
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Protein sequence | MAVTRADVAA MAGVSPALVS YVINGGPRPV SDQARRRVEA AIEALGYRPN AIASALRGGM TRSIGLLTPS PVNPFFAEMA EALVLELFQR GNTLSIGITD DDPARETLYL RSFLDRRVDG LIVTSSRAMT SLQRLHADPV PAVVIDRVDD LGVAGGPSSV HVDNLHAATY AVEHLQAHGH RVIGCIAGPW PVALSAERIA GWRAQQERIG ADASDALVEH AEFSESGGRE AALALLGPEA RRRSARASGP TALFVASDVQ AFGAIVACAE LGLRVPDDVA IVSLDGTATA RFSRPPLTSV RQPVVDMVRA AVGHLLDHIA DPELAPAHTV LRGNLVVGRS CGCGER
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