| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0196 |
|---|
| Symbol | |
|---|
| ID | 7862068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 211128 |
|---|
| End bp | 212855 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643864273 |
|---|
| Product | Dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_002880223 |
|---|
| Protein GI | 229818697 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGC TGCGCAGCCA GCAGTGGTAC GCCGGGCAGG GCCGGGACGC CTACATCCAC
CGTGCGTGGA TGCGGCGAGG TCTGCCGAAC GACGCGTTCG ACGGCACCCA CCCGCACGTC
GCCATCGCGA ACACCGCGTC GGACCTGTCG CCGTGCAACG CGCACCTCAC CGAGGTCGCC
CGCAGCGTGG CCGACGGCGT CCTGGCGGCC GGGGGCGTGC CGCTCGTCAT GCCGGTGCCG
TCGTTGGGCG AGACGCAGAT GCGGCCCACG GCGATGCTCT GGCGGAACAT GTCGGCGATG
GCCGTGGAGG AGATGATCCG CGGCAACCCG ATCGACGGCG TCGTCCTCCT CGGCGGGTGC
GACAAGACGA TCCCCGCGCT GCTCATGGGC GCGTCGTCCG TGGGACTGCC CGCCGTCGTC
GTCCCCGGCG GCCCCATGCT CACCGGGACG TTCCAGGGAG TCGCGCTCGG CTGCGGGACG
GACGTGTGGC GCCTCTCCGA GGAGGTGCGC GCCGGCACGC TGTCAGAGGA ACAGTTCACG
CGCAGCGAAT CGGCGATGAT CCGCAGCCGC GGGCACTGCA ACACGATGGG CACGGCGTCG
ACCATGGGCC TCCTGGCCGA GGCGCTGGGC ATGGTGCTCC CGGGCCTGGC CGGCACGCCC
GCGCCGGACA GCCGGCTGCT CGAGGGCGCG CACGCGACCG GGCGGCTCGC CGTCGAGCTC
GTCGCCGCGG ACCGCGGCCC GGCCGACGTC CTCACGAAGG CCTCCTTCCA CAACGCGATC
GTGACGCTGG CCGCGATCGG CGGCTCGACG AACGCCGTCG TGCACCTGCT CGCCATCGCC
GGGCGGCTCG GCATCGACCT CACCGTCGAC GACTTCGACC GGATCGGCTC GCACGTGCCG
CTGCTCGTCG ACCTGCAGCC GGCGGGCCGC TTCCTCATGG ACGACCTCTA CCGGGCCGGC
GGCCTGCACG CCGTGCTGCG CGAGGTGCGC GACCTGCTCG ACCCGGCCGC GCTCACCGTC
ACCGGCAAGC CGCTGGTGGA CTACCTCGAC GACGCCGACG TGTGGGACCG CGAGGTCATC
CGCACGATCG CCGAGCCGGT CCAGCCCGAC GCCGGGATCG CCGTCCTGCG CGGGAACCTC
GCCCCGGGCG GTGCGATCGT CAAGCCGGCC GCCGCGACGC CGGAGCTCCT GCAGCACACC
GGCCGCGCCG TCGTCTTCGA CTCGATCGAG GACCTGCACG CGCGGCTGGA CGACCCGGAC
CTCGACGTCG ACCCCTCGAG CGTGCTCGTG CTCCGCGGCT GCGGGCCGCG CGGGTACCCA
GGCATGCCCG AGGTGTCGAA CATGCCGATG CCGAAGAAGC TCGTCGAGGC GGGCGTCCGC
GACATGGTGC GCATCTGCGA CGGGCGGATG AGCGGGACCG CGTACGGGAC GGTGGTGCTG
CACGTGACGC CGGAGGCCGC GGCGGGCGGG CCGCTCGCCC GCATCCGGAC GGGCGACCTC
GTCCGCCTCG ACGTGCCGGG GCGGCGGCTC GACGTCGTCG GTCCCGACGG TGCACCGGTC
GAGCTGGACG CGCGCGAGCC CGCTCCGGCC GCGCTCGCCT CCTTCGCCGC GCCGGCGCGC
GGCTGGGAGC GTCTGTACGT CGACCACGTG CAGCAGGCCG ACACCGGAGC GGACCTCGAC
TTCCTCGTCG GCTCGAGCGG GCACCGGGTG GGCCGCGAGT CCCACTGA
|
|---|
| Protein sequence | MKQLRSQQWY AGQGRDAYIH RAWMRRGLPN DAFDGTHPHV AIANTASDLS PCNAHLTEVA
RSVADGVLAA GGVPLVMPVP SLGETQMRPT AMLWRNMSAM AVEEMIRGNP IDGVVLLGGC
DKTIPALLMG ASSVGLPAVV VPGGPMLTGT FQGVALGCGT DVWRLSEEVR AGTLSEEQFT
RSESAMIRSR GHCNTMGTAS TMGLLAEALG MVLPGLAGTP APDSRLLEGA HATGRLAVEL
VAADRGPADV LTKASFHNAI VTLAAIGGST NAVVHLLAIA GRLGIDLTVD DFDRIGSHVP
LLVDLQPAGR FLMDDLYRAG GLHAVLREVR DLLDPAALTV TGKPLVDYLD DADVWDREVI
RTIAEPVQPD AGIAVLRGNL APGGAIVKPA AATPELLQHT GRAVVFDSIE DLHARLDDPD
LDVDPSSVLV LRGCGPRGYP GMPEVSNMPM PKKLVEAGVR DMVRICDGRM SGTAYGTVVL
HVTPEAAAGG PLARIRTGDL VRLDVPGRRL DVVGPDGAPV ELDAREPAPA ALASFAAPAR
GWERLYVDHV QQADTGADLD FLVGSSGHRV GRESH
|
|---|
| |