Gene Bcav_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0176 
Symbol 
ID7862048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp182956 
End bp184095 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content77% 
IMG OID643864253 
ProductROK family protein 
Protein accessionYP_002880203 
Protein GI229818677 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCAAG GACTGCAGCA CACCGCCCCG CCACGCGCCG GCCATGAGGC GAGAATCCTC 
GACCACCTCC GCCGCCGCGG TCGCGCGAGC CGTGGCGAGA TCGCCACCGC CCTCGGGCTC
TCCCGCGCCA CCGTCTCGAC GGTGACCGGC CAGCTCGTGC GCACCGGCAC GCTCGTCGTC
GCTCCCGCCA CCGAGTCCGG GCGCCTCGGC CGCCGCCCGG AGGTCCTCAG TCTCGACCCG
TCCTCCGGCC TCGTCCTCGG GCTCGACTTC GGGCACACGC ACGTCACGGT CGTCGCGACC
GACGCGTCGC ACACGGTCGT CGGCTCCGGC ACGCGCCGCT TCCCCGCCAC CACCTCGTGG
ACGAGGCGGC GGGAGATCGC CGTCGGCATG GCCACCCACG TCCTCGCGAC GACGGACCGG
CCGGAGTCCC TCGCCGCCGT CGGCATCGGC GTGGCCGGCA GCATCGCGGG GCGGCCCGCC
GTGCTCGAGG CGATCGAAGC CACGTTCGCC GACGCGTTCG CCGTCCCGGT CCGCACGGAC
AACAACGCCC GCCTCGCCGG CCTCGCCGAG TGGCTGTGGG GGGCGGCCCA GGGAGCGACC
GACGTCATGT ACCTGCGCCT GTCCCACGGT GTGGGCGGCG CGCTCGTCAT CGACGGCCGG
ATGCGGCGCG GTCCGCGCGC GAGCGGCGGC GAGTTCGGCC ACGTGTGCGT GGACCCCGCC
GGTCCCGCCT GTCGATGCAC GAACCGCGGT TGCCTCGAGC GCTACGTCGG GCTCGATGCG
GTGCTCGCCG AGGCGGGGGC CGACGACGTC GGCGCCCTCC TCGCCGCGCT CGACCGCGGC
GACGACCGCG CTGTCGCGAC CCTCGGCACC GCGAGCGACC GCATCGGACT CGTCCTCGGC
AACGTCGCGA CGGTGCTGGA CACCCCGCGC GTCGTCCTCG GCGGCGAGCT GGCCGCCCTC
GGTGACCACC TCGTCGTCGG CGTCCGGCGG GCGATGTCGC GCCACGTGCT GCCGGACAAG
GCCGACGCCC TCGACGTACG CCCCGCCGCG CTGGGCGCCC GGGCCGGCGC GCTCGGCGGC
GTCGCCCTGG TGCTGCAGGA CACCTCGATC CCGCTGCCCG GGGCGCCGCG ACCCGCCTGA
 
Protein sequence
MPQGLQHTAP PRAGHEARIL DHLRRRGRAS RGEIATALGL SRATVSTVTG QLVRTGTLVV 
APATESGRLG RRPEVLSLDP SSGLVLGLDF GHTHVTVVAT DASHTVVGSG TRRFPATTSW
TRRREIAVGM ATHVLATTDR PESLAAVGIG VAGSIAGRPA VLEAIEATFA DAFAVPVRTD
NNARLAGLAE WLWGAAQGAT DVMYLRLSHG VGGALVIDGR MRRGPRASGG EFGHVCVDPA
GPACRCTNRG CLERYVGLDA VLAEAGADDV GALLAALDRG DDRAVATLGT ASDRIGLVLG
NVATVLDTPR VVLGGELAAL GDHLVVGVRR AMSRHVLPDK ADALDVRPAA LGARAGALGG
VALVLQDTSI PLPGAPRPA