Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0176 |
Symbol | |
ID | 7862048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 182956 |
End bp | 184095 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643864253 |
Product | ROK family protein |
Protein accession | YP_002880203 |
Protein GI | 229818677 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCAAG GACTGCAGCA CACCGCCCCG CCACGCGCCG GCCATGAGGC GAGAATCCTC GACCACCTCC GCCGCCGCGG TCGCGCGAGC CGTGGCGAGA TCGCCACCGC CCTCGGGCTC TCCCGCGCCA CCGTCTCGAC GGTGACCGGC CAGCTCGTGC GCACCGGCAC GCTCGTCGTC GCTCCCGCCA CCGAGTCCGG GCGCCTCGGC CGCCGCCCGG AGGTCCTCAG TCTCGACCCG TCCTCCGGCC TCGTCCTCGG GCTCGACTTC GGGCACACGC ACGTCACGGT CGTCGCGACC GACGCGTCGC ACACGGTCGT CGGCTCCGGC ACGCGCCGCT TCCCCGCCAC CACCTCGTGG ACGAGGCGGC GGGAGATCGC CGTCGGCATG GCCACCCACG TCCTCGCGAC GACGGACCGG CCGGAGTCCC TCGCCGCCGT CGGCATCGGC GTGGCCGGCA GCATCGCGGG GCGGCCCGCC GTGCTCGAGG CGATCGAAGC CACGTTCGCC GACGCGTTCG CCGTCCCGGT CCGCACGGAC AACAACGCCC GCCTCGCCGG CCTCGCCGAG TGGCTGTGGG GGGCGGCCCA GGGAGCGACC GACGTCATGT ACCTGCGCCT GTCCCACGGT GTGGGCGGCG CGCTCGTCAT CGACGGCCGG ATGCGGCGCG GTCCGCGCGC GAGCGGCGGC GAGTTCGGCC ACGTGTGCGT GGACCCCGCC GGTCCCGCCT GTCGATGCAC GAACCGCGGT TGCCTCGAGC GCTACGTCGG GCTCGATGCG GTGCTCGCCG AGGCGGGGGC CGACGACGTC GGCGCCCTCC TCGCCGCGCT CGACCGCGGC GACGACCGCG CTGTCGCGAC CCTCGGCACC GCGAGCGACC GCATCGGACT CGTCCTCGGC AACGTCGCGA CGGTGCTGGA CACCCCGCGC GTCGTCCTCG GCGGCGAGCT GGCCGCCCTC GGTGACCACC TCGTCGTCGG CGTCCGGCGG GCGATGTCGC GCCACGTGCT GCCGGACAAG GCCGACGCCC TCGACGTACG CCCCGCCGCG CTGGGCGCCC GGGCCGGCGC GCTCGGCGGC GTCGCCCTGG TGCTGCAGGA CACCTCGATC CCGCTGCCCG GGGCGCCGCG ACCCGCCTGA
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Protein sequence | MPQGLQHTAP PRAGHEARIL DHLRRRGRAS RGEIATALGL SRATVSTVTG QLVRTGTLVV APATESGRLG RRPEVLSLDP SSGLVLGLDF GHTHVTVVAT DASHTVVGSG TRRFPATTSW TRRREIAVGM ATHVLATTDR PESLAAVGIG VAGSIAGRPA VLEAIEATFA DAFAVPVRTD NNARLAGLAE WLWGAAQGAT DVMYLRLSHG VGGALVIDGR MRRGPRASGG EFGHVCVDPA GPACRCTNRG CLERYVGLDA VLAEAGADDV GALLAALDRG DDRAVATLGT ASDRIGLVLG NVATVLDTPR VVLGGELAAL GDHLVVGVRR AMSRHVLPDK ADALDVRPAA LGARAGALGG VALVLQDTSI PLPGAPRPA
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