Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0123 |
Symbol | |
ID | 7859288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 128587 |
End bp | 129372 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643864200 |
Product | regulatory protein GntR HTH |
Protein accession | YP_002880150 |
Protein GI | 229818624 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGG CCGGCGCGGA GACCGAGCGC AGCTCCGGGT ACTCGATGCG CGGGCTCCAG GGCCGGGTGA TCGAGGCGAT CGGACTCGAT GTGGTCGGTG GCCGGTACCG GCCTGGCCAG CTGCTCCCGC GGGAGGCCGA GCTCATGGTC GAGTACGGCG TGAGCCGGAC GTCGTTGCGC GAGGCGATGA AGGTGCTGGC GGCGAAGGGC CTCGTCGACA TCCGGCAGAA GGTCGGGACA CGCGTGCGCC CCGTCGAGAT GTGGAACGCC TTCGACAGCG ACCTGCTGGC CTGGTTCCAC GCCTCCGGTC AGGGCGAGGC GCCGATGCGC GACCTCGTCG AGCTGCGTCA GGTGCTGGAA CCGGCCGCGG CGCGCTTCGC TGCCACCCGG GCCACGATGG CCGACCTGCA CGACCTGGAG CGGGCACAGC AGGCGATGCT CGACACGGCG CACGACCACG CCGGGTATGC GGCGACCGAC GTCGCCTTCC ACCTGGCCGT CTACGGTGCC TCGCACAACG CGCTGCTGCG ACGGTTCGGC CACCTCGTGG CCGACTTCAT GCACCTCAGC TTCGACGTGC AGCAGCACGC GGCGGCGGAC GGACCCGCCG ACTTCACGGA GGACGCGCAG GGACATGCGG CGATCTTCGA GGCGATCAAC CGGGGCGACG CCGACGCCGC GGCGGAGGCC ATGCTCCAGG TCGTGCTCGA CGGCAAGAGC GCGCTCATCA AGGCGCTGTC CCATCGCGGG ACGGCGGAGT CACGCGGGAC GAGAGGAGCT CCATGA
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Protein sequence | MTEAGAETER SSGYSMRGLQ GRVIEAIGLD VVGGRYRPGQ LLPREAELMV EYGVSRTSLR EAMKVLAAKG LVDIRQKVGT RVRPVEMWNA FDSDLLAWFH ASGQGEAPMR DLVELRQVLE PAAARFAATR ATMADLHDLE RAQQAMLDTA HDHAGYAATD VAFHLAVYGA SHNALLRRFG HLVADFMHLS FDVQQHAAAD GPADFTEDAQ GHAAIFEAIN RGDADAAAEA MLQVVLDGKS ALIKALSHRG TAESRGTRGA P
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