Gene Bcav_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0123 
Symbol 
ID7859288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp128587 
End bp129372 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content71% 
IMG OID643864200 
Productregulatory protein GntR HTH 
Protein accessionYP_002880150 
Protein GI229818624 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGG CCGGCGCGGA GACCGAGCGC AGCTCCGGGT ACTCGATGCG CGGGCTCCAG 
GGCCGGGTGA TCGAGGCGAT CGGACTCGAT GTGGTCGGTG GCCGGTACCG GCCTGGCCAG
CTGCTCCCGC GGGAGGCCGA GCTCATGGTC GAGTACGGCG TGAGCCGGAC GTCGTTGCGC
GAGGCGATGA AGGTGCTGGC GGCGAAGGGC CTCGTCGACA TCCGGCAGAA GGTCGGGACA
CGCGTGCGCC CCGTCGAGAT GTGGAACGCC TTCGACAGCG ACCTGCTGGC CTGGTTCCAC
GCCTCCGGTC AGGGCGAGGC GCCGATGCGC GACCTCGTCG AGCTGCGTCA GGTGCTGGAA
CCGGCCGCGG CGCGCTTCGC TGCCACCCGG GCCACGATGG CCGACCTGCA CGACCTGGAG
CGGGCACAGC AGGCGATGCT CGACACGGCG CACGACCACG CCGGGTATGC GGCGACCGAC
GTCGCCTTCC ACCTGGCCGT CTACGGTGCC TCGCACAACG CGCTGCTGCG ACGGTTCGGC
CACCTCGTGG CCGACTTCAT GCACCTCAGC TTCGACGTGC AGCAGCACGC GGCGGCGGAC
GGACCCGCCG ACTTCACGGA GGACGCGCAG GGACATGCGG CGATCTTCGA GGCGATCAAC
CGGGGCGACG CCGACGCCGC GGCGGAGGCC ATGCTCCAGG TCGTGCTCGA CGGCAAGAGC
GCGCTCATCA AGGCGCTGTC CCATCGCGGG ACGGCGGAGT CACGCGGGAC GAGAGGAGCT
CCATGA
 
Protein sequence
MTEAGAETER SSGYSMRGLQ GRVIEAIGLD VVGGRYRPGQ LLPREAELMV EYGVSRTSLR 
EAMKVLAAKG LVDIRQKVGT RVRPVEMWNA FDSDLLAWFH ASGQGEAPMR DLVELRQVLE
PAAARFAATR ATMADLHDLE RAQQAMLDTA HDHAGYAATD VAFHLAVYGA SHNALLRRFG
HLVADFMHLS FDVQQHAAAD GPADFTEDAQ GHAAIFEAIN RGDADAAAEA MLQVVLDGKS
ALIKALSHRG TAESRGTRGA P