Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0105 |
Symbol | |
ID | 7859270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 112870 |
End bp | 113592 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643864182 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_002880132 |
Protein GI | 229818606 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0679113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGGCG GAGCGGGTCG CCTCGCCTCT GCCGCGAACC TCCTCGGCCG CGGCCGCACG GCCGACGTCT ACGACCTGGG CGACGGCCTC GTGCTGCGTC GCTACCGCGA CGGCTACGAC GCCGAGCGTG AGGCCGAGAT CCAGGCGCAC GTCGCCGAGC ACGGGTTCCC CGCGCCCGCG GTGGTCGAGG CGCACGGACC CGACCTCGTG ATGGCCCGGG TGGCGGGCCC GACGATGCTC GGAGCGCTGG TCGCCGGCGA CGCACGGCCC GACGAGGCCG CCCACCTCCT CGCGGACCTC CACGACCGGC TGCACGCCCT GCCCGCACCT GCCGGCCCGC GCGAGCCGGG CGACGTCGTC GTCCATCTCG ATCTGCATCC GGACAACGTC ATGCTCGACC CCGAGCGTGG GCCCGTGCTC ATCGACTGGG CGAACGCGCG GCTCGGGACC GCCGACCTCG ACGTCGCGAT GACGGCGCTC ATCCTCGCGG AGGTGGCGGT GGCACCGCCG GACTCGGAGC TCGCGGCCCA GGCCGGCCCG GCCCTCGCGG CCGTGCCGGC GCTGGGAGCG GCGTTCCTCG CGGCGGTCGA CGGCGATGCC CGGCTCGGCC TCGCGGGCGC TCTCGCGATG CGCGCGGCCA ACCCCACGCT GGACGCCGCC GAGAAGGAGC GACTGTCCAC CGCCGTGCGC GCCGTGCGGG AGTGGGCCGA CGCCGCGGGC TGA
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Protein sequence | MSGGAGRLAS AANLLGRGRT ADVYDLGDGL VLRRYRDGYD AEREAEIQAH VAEHGFPAPA VVEAHGPDLV MARVAGPTML GALVAGDARP DEAAHLLADL HDRLHALPAP AGPREPGDVV VHLDLHPDNV MLDPERGPVL IDWANARLGT ADLDVAMTAL ILAEVAVAPP DSELAAQAGP ALAAVPALGA AFLAAVDGDA RLGLAGALAM RAANPTLDAA EKERLSTAVR AVREWADAAG
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