Gene Bcav_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0062 
Symbol 
ID7858265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp65896 
End bp67686 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content74% 
IMG OID643864140 
Productprotein of unknown function DUF1680 
Protein accessionYP_002880090 
Protein GI229818564 
COG category[S] Function unknown 
COG ID[COG3533] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.560227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC CCGAGACCCC GCCGTCGCGC TCCGCCGTCT CCGCCGTGCT GCGCCCGCTC 
GGCTACACCG GTCGGGTGCG GATCACCGAC GGCCCGCTCG CTGACCGCAT CGCGGATGCG
GCCGAGACGT ACCTCGGGAT GTCGCCCGAC GACGTCGTGC ACGGCTTCCG CCTCCAGGCC
GGGCTGCCCG CGCCGGGGAA CCCGATGACC GGTTGGTCCA GCCGGACGAG CCAGCCGACG
TTCGGCCAGT GGGTGAGCGG CCTCGCACGG CTCGGGGTCA CGGCCGGCGT CGCGGAGGCG
TCCCAGCGGG CCGTCGATCT CGTGGACGCG TTCGCGGCCA CCGTGGGCGA CGACGGCGAC
GCGCGGATGG GGCTGTACGG GTACGAGAAG CTCGTGTGCG GGCTGGCCGA CACGGCGCTC
TACGCCGGCC ACGAGGACGC TCTCGCGCTG CTCGGACGGA CGGCCGAGTG GGCGTCCCGG
ACGTTCGAGC GCGCTCGTCC CGCGGCGTCC CCGAACGACT TCGCGGGCGG CCGGATCGGG
CCCGCGAGCC ACGCCCGCAC GATGGAGTGG TACACGTTCG CGGAGAACCT CTACCGAGGC
TGGCTGGCGG GGGCGGACGA CGCCGTGCGG GAGTTCGCGA GCGAGTGGCA CTACGACGCC
TACTGGGACA GGTTCCTCAC CCCGCCACCG CCCGGGCAGC CGTGGGACGT GCCGACGTGG
CTGCACGCGT ACTCGCACGT CAACACGTTC GCGTCGGCCG CCGCCGCGTA CGAGGTCACG
GGCGAGGTGC GGTACCTCGA CATCCTGCGC AACGCCCACA CCTACCTGAC CACGACGCAG
ACGTACGCGA CCGGCGGCTA CGGGCCGAGC GAGCTCACCC TGCCCGAGGA CGGCTCGCTG
GGTCGGAGCA TCGAGTGGCG CACGGACACC GCGGAGATCG TGTGCGGGTC GTGGGCCGCG
TTCAAGCTGT CGAGCGCGCT GCTCAAGCAC ACCGGGGAGG CGCGGTACGC CGACTGGGTC
GAGCAGCTCG TGTACTCGGG GATCGGCGCG GTGACCCCGG TGCGGCCGGG TGGGCGGACG
CCGTACTACC AGGACCTCCG CCTCGGGATC GCGACGAAGC TGCCGCACTG GGACGACTGG
CCCTGCTGCT CGGGCACGTA CCTCCAGGCG GTGTCGCACC TGCCCGACCT CGTGTACTTC
GGCGACGACG ACGGCGGGCT CGCCGTCGCG CTGTACGTCC CGTCCACCGT GTCGTGGGAG
TCCGCCGGCT CGACCGTCAC GCTGACGCAG CGCACGGCCT TCCCGGTCGA GGACACGTCG
ACGATCACCG TGGGCGGCTC CGGCAGGTTC CGGCTCCGAC TCCGGGTGCC GCCGTGGAGC
GAGGGCTTCC GGGTCTCCGT CAACGGCGTG GCGGTCGACG GCGTGGCGAC GCCGGGGGAC
TGGTTCGTGC TCGAGCGGGA CTGGGCGGAC GGCGACGTCG TCACCGTCAC GCTCGGCGCC
GGGCTGCGGG TGCTGCCCGT GGACCGCTGG CACCCGAACC GGGTCGCGTT CGCCCACGGC
CCGGTGGTGC TGGCCCAGAA CGCGGACTGG ACGATGCCGA TGTCGCTGCC GACCCCGTGG
GAGATGGTGG ATCTCGACGC CGCGTTCGAA CGGGGGGAGG GGCTGCGGTA CGCGCCGGTC
GGCGTCGGGA CGGCGCGGCT GCCGCTCGGC GAGCTCCGAC CGCTCGCGGA CGTCCCGGAG
CGGGTCCCGT ACCGCGTGTA CGCCGACCTC GACGACCCGC GCATCGTCTG A
 
Protein sequence
MTAPETPPSR SAVSAVLRPL GYTGRVRITD GPLADRIADA AETYLGMSPD DVVHGFRLQA 
GLPAPGNPMT GWSSRTSQPT FGQWVSGLAR LGVTAGVAEA SQRAVDLVDA FAATVGDDGD
ARMGLYGYEK LVCGLADTAL YAGHEDALAL LGRTAEWASR TFERARPAAS PNDFAGGRIG
PASHARTMEW YTFAENLYRG WLAGADDAVR EFASEWHYDA YWDRFLTPPP PGQPWDVPTW
LHAYSHVNTF ASAAAAYEVT GEVRYLDILR NAHTYLTTTQ TYATGGYGPS ELTLPEDGSL
GRSIEWRTDT AEIVCGSWAA FKLSSALLKH TGEARYADWV EQLVYSGIGA VTPVRPGGRT
PYYQDLRLGI ATKLPHWDDW PCCSGTYLQA VSHLPDLVYF GDDDGGLAVA LYVPSTVSWE
SAGSTVTLTQ RTAFPVEDTS TITVGGSGRF RLRLRVPPWS EGFRVSVNGV AVDGVATPGD
WFVLERDWAD GDVVTVTLGA GLRVLPVDRW HPNRVAFAHG PVVLAQNADW TMPMSLPTPW
EMVDLDAAFE RGEGLRYAPV GVGTARLPLG ELRPLADVPE RVPYRVYADL DDPRIV