| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0028 |
|---|
| Symbol | |
|---|
| ID | 7858230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 28243 |
|---|
| End bp | 29724 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643864105 |
|---|
| Product | Peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_002880056 |
|---|
| Protein GI | 229818530 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.790877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCCC CGCTGCGGCG CCTCTCCGCC GTCGTCATGT CGATGTTCCT CGTGCTCATG
GTGGGCGTGA CGTGGGTGCA GTACGTCCAG GCGCCCGGCC TCAACGACGA CCCGCGCAAC
GTCCGCACCA CGTATCGGGA GTACGGTCGC GACCGCGGGC CCATCGTCGT CGCGGGCACC
CCCGTCGCGG AGTCCGTGCC CGTCGACGAC CCGTTCGGGT TCCAGCGCAC GTACGTGCAG
GGCGACGTCT ACGCGCCGCT CACGGGGTAC CACTCGATCG TCTTCGGCTC CTCGATGATC
GAGGACGCGG CGAACGACGT CCTCAACGGG ACGGCGTCGT CGCTGTGGCT CGAGCGGCTC
CAGTCGCTCG TCACGGGTCG CCAGCCCCGC GGCGGCTCCG TGGAGCTGAC GATCGACCCG
GTCGCGCAGC AGGCGGCCTG GGATGCGCTC GCCGGCCGAG CCGGCGCCGC CGTGGCCATC
GACCCGCGCA CCGGGGCCAT CCTGGCGATG GTGTCGACCC CGAGCTACGA CCCGAACACG
CTCGCGGCGC ACAGCTCGTC CGCCGTGAAC GAGGCGTGGG ACGCCCTGCT CGCCGACCCG
GCCCGGCCTC TGGACAACCG CGCGATCGCG GGCAACCAGT ACGCGCCGGG TTCGACGTTC
AAGCTCGTCG ACACCGTGGC GCTGCTCGCC ACCGGCGACT TCGCTCCAGA CACGCAGGTC
CCCGCGCCGA CGACGTACCG CGCCCCCGGC GCGGGCGCGG ACATCCGCAA CCCCGGCGGC
GGGACGTGCG GCGGCGACAC CGTCACGCTC GAGTACGCGC TCCAGGAGTC GTGCAACACG
CCGTTCGCGC AGCTCGCCGT CGAGGAGCTC GGCGACGAGG CGTTGCGCGA GCAGGCCGAG
GCGTTCGGGT TCGGGCAGGA GCTCCACGTC CCGATGACGG TGACCCCGAG CCGGTTCCCG
CAGGGCGTCG ACGGAGAGCT CGACCCCGCG TTCCTGGCCC TCGCCGCGAT CGGGCAGTAC
GACGTGCGCG TGACGCCGCT GCAGATGGCG ATGGTGTCCG CGGCGATCGC CAACGACGGC
GTGCTCATGA CGCCGTACAC GATCGCCACG GAGCGCGGTC CTGACCTGGG AGTGTTGTCC
CAGACCACGC CGAGCGAGTT CTCCCAGCCG ATGTCCGCGG ACGTCGCGGA GACGATGACG
CAGCTGATGA CGAACGTCGT CGAGAACGGC ACCGGGCAGA CGGCGCAGAT CCCCGGCGTC
GCCGTCGCCG GCAAGACCGG AACCGCGGAG TCGGGCATCG AGGGTGACGG ACCCGAGGCC
AACCCGCACG CGTGGTTCAC CGCGTTCGCG CCGGCCGACG ACCCGCAGGT GGCCGTCGCC
GTCGTCGTCG AGAACGGCGG CTCGCTGTCC AGCGAGTACA CCGGCGCCCA GCTCGCCGCA
CCGATCGCGC GCTCGATCAT GCAGGCGGTG ATCGACCAGT GA
|
|---|
| Protein sequence | MNAPLRRLSA VVMSMFLVLM VGVTWVQYVQ APGLNDDPRN VRTTYREYGR DRGPIVVAGT
PVAESVPVDD PFGFQRTYVQ GDVYAPLTGY HSIVFGSSMI EDAANDVLNG TASSLWLERL
QSLVTGRQPR GGSVELTIDP VAQQAAWDAL AGRAGAAVAI DPRTGAILAM VSTPSYDPNT
LAAHSSSAVN EAWDALLADP ARPLDNRAIA GNQYAPGSTF KLVDTVALLA TGDFAPDTQV
PAPTTYRAPG AGADIRNPGG GTCGGDTVTL EYALQESCNT PFAQLAVEEL GDEALREQAE
AFGFGQELHV PMTVTPSRFP QGVDGELDPA FLALAAIGQY DVRVTPLQMA MVSAAIANDG
VLMTPYTIAT ERGPDLGVLS QTTPSEFSQP MSADVAETMT QLMTNVVENG TGQTAQIPGV
AVAGKTGTAE SGIEGDGPEA NPHAWFTAFA PADDPQVAVA VVVENGGSLS SEYTGAQLAA
PIARSIMQAV IDQ
|
|---|
| |