Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0017 |
Symbol | |
ID | 7858219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 18061 |
End bp | 18963 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643864094 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002880045 |
Protein GI | 229818519 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.385749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGC AGACCCTCTC CCACCCCGCC GCCACCTCCC AGGCGGGCGC TCCCTCCGGC ACGGCTCGAC GACGCCGCGG CGTGCGTCCG GCCCGCGTGG TCGCCTTCGC GATCCTCGTG GTGCTCGCTC TCGCCTGGCT CATCCCGGTG CTGTGGGCGG TGCTCACCTC GTTCAAGACC GAGGCGGACG CCGCGGCGTT CCCGATCTCG ATCTGGCCGA CGCAGGGCTT CACGCTCGAG GCCTTCCGCA CCACCCTCGC CGAGGGCATG GTGCCGCGCT GGGCGTGGAA CAGCCTGCTC ACGTCGACGG CGGTCACGGT GATCACCGTA GTGATCTCGT CGCTCGCCGG CTACGCGATG TCGCGGTTCG ACTTCGCCGG CCGGAGGATG CTGCTCGCCG TCACCGTCGC GTCGATCATG ATCCCCGGCC AGATCCTCAT CGTGCCGCTG TTCCAGCAGA TGCTGACGTT CAACCTCGTC GACACCTACT GGGGCATCAT CCTCCCGCAG GTCATCGCGG CGCCGATGGT GTTCATCCTC AAGAAGTTCT TCGACCAGAT CCCGCGGGAG CTGGAGGAGG CGGCGCTCAT GGACGGCGCG AGCCGGCTGC GGATCCTGTG GCAGATCGTG GTGCCGCTGT CGCGCCCGAT CCTCGGGGCC GTGTCGATCT TCGTGTTCAT CGGCGCATGG AACAACTTCC TGTGGCCGTT CATCGTCGTC AACAAGGCCG AGCTCATGAC GCTCCCGGTC GGTCTGCAGA CTGTCATCAG CGCCTACGGC ATCCAGTACG CGCAGAACAT GGCTCAGGCG GTCCTCGCGG CCCTGCCGCT GATCGTGGTG TTCCTGTTCT TCCAGCGGCA GATCATCAAG GGCATCTCCA CCACCGGGAT CGCCGGCGCC TGA
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Protein sequence | MTAQTLSHPA ATSQAGAPSG TARRRRGVRP ARVVAFAILV VLALAWLIPV LWAVLTSFKT EADAAAFPIS IWPTQGFTLE AFRTTLAEGM VPRWAWNSLL TSTAVTVITV VISSLAGYAM SRFDFAGRRM LLAVTVASIM IPGQILIVPL FQQMLTFNLV DTYWGIILPQ VIAAPMVFIL KKFFDQIPRE LEEAALMDGA SRLRILWQIV VPLSRPILGA VSIFVFIGAW NNFLWPFIVV NKAELMTLPV GLQTVISAYG IQYAQNMAQA VLAALPLIVV FLFFQRQIIK GISTTGIAGA
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