| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6503 |
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| Symbol | |
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| ID | 4315407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1187117 |
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| End bp | 1188895 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638154347 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_778381 |
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| Protein GI | 115361244 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.120205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.402945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTCTCA TCGAAGTCAA GGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC
GAAGTCAACG TCAAGCCAGG CGACATGATC GAAAAAGAAC AAACGCTCAT CACGCTCGAA
TCCGATAAAG CCTCCATGGA AGTGCCCAGC GACGTCGCCG GCACAGTCAA GGAAGTCAAG
GTCAAAGCCG GCGAGAAAGT CTCGCAAGGC ACCATCATCG CCATCGTCGA AACAGCAGCA
AGCGACGCCG CACCCGCGAA AGCACCCGAG GCAGCGAAAC CCGGAGCGGC TGCACCCGCT
CCGGCCGCCG CCGCTCCCGC AGCCGCTCCG GCTCCCGCGC CGCAAGCCGG CAGCTACAGC
GGTGCCGCCG ACATCGAGTG CGACATGCTC GTGCTCGGCG CCGGCCCCGG CGGCTACTCA
GCCGCGTTCC GCTCAGCCGA CCTCGGCATG AAGACGGTGC TGGTCGAACG CTACTCGACG
CTCGGCGGCG TGTGCCTGAA CGTCGGTTGC ATCCCGTCGA AGGCGCTGCT GCACACGGCA
CTCGTCATCG ACGAAGCCGC GGCGCTCGCG TCGCACGGCA TCACGTTCGG CAAGCCGGAA
GTCGATCTCG ACAAGCTGCG CGACTTCAAG GGCGGCGTGG TCAAGAAACT GACGACGGGC
CTCGCCGGCA TGGCGAAGGC GCGCAAGGTC GAAGTGGTTA CCGGCGTCGG CACATTCGTC
GATCCGTATC ACATGGAAGT GCAGGGCGAA AACGGCAAGA AGGTCGTCAA GTTCAAGCAG
GCGATCATCG CCGCAGGCTC GCAAGCCGTG AAGCTGCCGT TCATGCCGGA AGACCCGCGC
GTCGTCGATT CGACGGGCGC ACTCGAACTG CGCCAACTGC CGAAGCGGAT GCTCGTGATC
GGCGGCGGCA TCATCGGCCT CGAAATGGCC ACGGTGTACG CGACGCTCGG CGCCGAGATC
GACGTGGTCG AAATGATGGA CGGCCTGATG ATGGGCGCGG ACCGCGATCT CGTGAAGGTC
TGGGAAAAGT ACAACGCGAA GCGCTTCGGC AACGTGATGC TGAAGACCAA GACGGTCGGC
GCGGAAGCGA AGGAAGACGG CATCTACGTG AAGTTCGAGG GCGAAAAGGC GCCGGCGGAA
GCGCAGCGCT ACGACCTCGT GCTCGTCGCG GTGGGCCGCA GCCCGAACGG CAAGACGATC
GGCGCCGACA AGGCGGGCGT CGCCGTCACC GACCGCGGCT TCATCGACGT CGACAAGCAG
ATGCGCACGA ACGTCCCGCA CATCTTCGCG ATCGGCGACG TCGTCGGCCA GCCGATGCTC
GCGCACAAGG CCGTGCATGA AGGCCACGTC GCAGCGGAAG CCGCGCACGG CGAGAAGGCG
TACTTCGACG CGCTGCAGAT CCCGTCGGTG GCCTATACCG ATCCGGAAGT GGCGTGGGCC
GGCAAGACGG AAGACCAGTG CAAGGCCGAA GGCATCAAGT ACGGCAAGGC CGTGTTCCCG
TGGGCCGCAT CGGGCCGCGC GATCGCGAAC GGCCGCGACG AAGGCTTCAC GAAGCTGATC
TTCGACGAGG AAACCCATCG CGTGATCGGC GGCGGCATCG TCGGCCTGAA CGCAGGCGAC
CTGATCAGCG AAGTGTGCCT CGCCGTCGAA ATGGGCGCGG ACGCGGAAGA CATCGGCAAG
ACGATCCATC CGCATCCGAC GCTCGGCGAA TCGGTCGGCA TGGCCGCCGA GCTGTACGAA
GGTGTGTGTA CGGACCTGCC GCCGCCCAGA AAGGCCTGA
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| Protein sequence | MCLIEVKVPD IGDFSGVDVI EVNVKPGDMI EKEQTLITLE SDKASMEVPS DVAGTVKEVK
VKAGEKVSQG TIIAIVETAA SDAAPAKAPE AAKPGAAAPA PAAAAPAAAP APAPQAGSYS
GAADIECDML VLGAGPGGYS AAFRSADLGM KTVLVERYST LGGVCLNVGC IPSKALLHTA
LVIDEAAALA SHGITFGKPE VDLDKLRDFK GGVVKKLTTG LAGMAKARKV EVVTGVGTFV
DPYHMEVQGE NGKKVVKFKQ AIIAAGSQAV KLPFMPEDPR VVDSTGALEL RQLPKRMLVI
GGGIIGLEMA TVYATLGAEI DVVEMMDGLM MGADRDLVKV WEKYNAKRFG NVMLKTKTVG
AEAKEDGIYV KFEGEKAPAE AQRYDLVLVA VGRSPNGKTI GADKAGVAVT DRGFIDVDKQ
MRTNVPHIFA IGDVVGQPML AHKAVHEGHV AAEAAHGEKA YFDALQIPSV AYTDPEVAWA
GKTEDQCKAE GIKYGKAVFP WAASGRAIAN GRDEGFTKLI FDEETHRVIG GGIVGLNAGD
LISEVCLAVE MGADAEDIGK TIHPHPTLGE SVGMAAELYE GVCTDLPPPR KA
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