| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6449 |
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| Symbol | |
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| ID | 4315353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1078751 |
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| End bp | 1079680 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638154293 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_778327 |
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| Protein GI | 115361190 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.585538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTC CCGTCCATCT CAACGCATTA CGGGCCTTTG AGGCCAGCGC TCGCCATCAG
AGCTTCTCTG CGGCTGCGGT GGAACTGAAC GTCACACCGG CAGCGGTCGG GCAATTGGTG
CGCACACTCG AGGATTGGTT GGGCACGCCG TTGTTTCTTC GAAGCACCAG CGGGCGAGCG
AGGCTCGTCC CGACGGAGAT GGCCGAACGC GCGTTGCCGG ATATCAGGGC CGGTTTCGAC
CGGCTGACGC TGGGTTTGGA GCGGTTGCAG GAGATCTCGA CCAGCGGTGT GCTCACCGTG
ACGGTCAGCC CGGCGTTTGC CGCCAAGTGG CTGTTACCCC GCATCGATCG GTTCCAGGCC
GCATGGCCTG ACACGGACGT GCGCCTGGAT ACGAACCATA AGTCAGTCGA TTTCGTGGCC
CAGCGGATCG ATATCGGTGT GCGCTATGGG ATGGGAAGCT GGTCGGGCCT CAAGGCGGAC
AAGCTGATGG ACGAGGAGGT TTATCCGGTC TGCTCACCGG AACTGCTGCG GCAGCATTGG
CGTCTGCGCA AACCGGCAGA CATCGTGCGC GAGACCTTGA TCCACGACTT GTCGATGGAC
GGCCACGCAG GCTTTCCGAC TTGGGAGGTA TGGATGAAGA AAGCCGGTGT GACGAACGCG
CCTCCCACGC GCGGCATGCA GATCAACAAT TCCGCCGCGG TGCTCCAGGC TGCGATCGAG
GGACACGGCA TTGCGCTCGC ACGCAGCGTC ATGGCGCGGG ATGATCTTGC GAGCGGACGA
TTGGTTCGAT TATTCCCGGA TATCAGCGTT GCGTCCGAGT TGGCCTACTA CGTCGTTTAT
CGGCCGGAGT GCGCCAGCTT GCCGAGATTG GTCGCCTTTC GTGACTGGTT GCTCGCCGAG
GCGACGCAGC ATGACGGAAC AAGTCCCTGA
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| Protein sequence | MKSPVHLNAL RAFEASARHQ SFSAAAVELN VTPAAVGQLV RTLEDWLGTP LFLRSTSGRA
RLVPTEMAER ALPDIRAGFD RLTLGLERLQ EISTSGVLTV TVSPAFAAKW LLPRIDRFQA
AWPDTDVRLD TNHKSVDFVA QRIDIGVRYG MGSWSGLKAD KLMDEEVYPV CSPELLRQHW
RLRKPADIVR ETLIHDLSMD GHAGFPTWEV WMKKAGVTNA PPTRGMQINN SAAVLQAAIE
GHGIALARSV MARDDLASGR LVRLFPDISV ASELAYYVVY RPECASLPRL VAFRDWLLAE
ATQHDGTSP
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