| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6423 |
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| Symbol | |
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| ID | 4315327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1050385 |
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| End bp | 1051089 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638154267 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_778301 |
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| Protein GI | 115361164 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.599394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATG CTGAACAACT CAAGAGCGAG ATCAAGGTTG TCATGTTCGA TCAATACGGT
ACCGTGGTCG ACATGCAGAG GGGGCTGACG GAAATCGCCG CACCCTTTCT CAAGGAGAAG
GGTTGGACGG GCAACCCGAA TTCGTTCGTG ACGTGGTGGC GCCGCACTCA CTTCGAGAAC
TCGATGATCG ATGCGCTGCT CCACAAGGAG CACACGCCGT ACCGTGAAAT CGGCCATCGT
GCGGTCGCCT ATACCCTGGA GCGCGCAGGC ATCCAGTACA CGCAAGAGGA AGTCCGCTAT
CTCGTGTCGT GCATCGAGCG CCTCAAGCCG TTCCCAGACG TTCCCGAGGC ACTTGCACGT
CTGCAGACGC GCTATAAGAT CGTGGTTCTT TCGAACGGCG ATCCCGACAT GCTTGAAACG
GCCAAGGAAT ACCACAAGAT TCCGTTCGAC AACGTGATTT CCGTGAAAGC CGCCGAGTCG
TTCAAGCCGC ACGTCGCAAC TTACACGAAG GCAGCGGAGA TCATGGGGGT GAAACTCAGC
GAAGTTCTGT TCGTTGCGAA CCATGCATTC GATTGCATCG GTGCAAAGTC GGCTGGCATG
CGCTCGGCAT TCATCGACCG TCGCAAGCGC CCGTTCGGAG GCACGCCGCA CCAACCGGAT
ATCTGGGTTG ACGACATGTC TTCGCTCGCG GATCTGATGG TCTAA
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| Protein sequence | MSNAEQLKSE IKVVMFDQYG TVVDMQRGLT EIAAPFLKEK GWTGNPNSFV TWWRRTHFEN
SMIDALLHKE HTPYREIGHR AVAYTLERAG IQYTQEEVRY LVSCIERLKP FPDVPEALAR
LQTRYKIVVL SNGDPDMLET AKEYHKIPFD NVISVKAAES FKPHVATYTK AAEIMGVKLS
EVLFVANHAF DCIGAKSAGM RSAFIDRRKR PFGGTPHQPD IWVDDMSSLA DLMV
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