| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6321 |
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| Symbol | |
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| ID | 4315225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 920850 |
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| End bp | 922034 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638154165 |
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| Product | porin |
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| Protein accession | YP_778199 |
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| Protein GI | 115361062 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00119227 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGA GATTGATTTT CGTCGCGATG CCGGCGCTCT GTGCTGCGCC GGCCTTTGCC
CAAGGCAGCG TCACGCTGTA CGGGCTGGTC GATGCCGGCA TCGACTATAC GAACAATGTA
GGCGGCCACA GTGCGTGGCA GATGGCGAGC GGCTTCGCGC AGGGCAGCCG GTGGGGGCTG
AAGGGCACCG AGGATCTCGG CGGCGGCTAC AGCGCGCTGT TCCAGATCGA GAACGGCTTC
AACGTGAACA GCGGCACGCT CGCACAGGGC GGCCGCATGT TCGGGCGGCA GGCTTACGTC
GGGCTCGGCA ACACGCGCTT CGGCACGCTG ACGCTCGGCC GGCAATACGA CTCGGTCGTC
GACTATCTCG CGCCGACGAC CGCGAACGGC AGCTGGGGCG TCTATCCGTT CTCGCATCCG
CTCGACAACG ACAACACCGG CAACACGTTC CGCGTGAACA ACACGGTCAA GTACGCGAGC
CCGGATTTCG CCGGTTTCTC GTTCGGTGGC ACGTACAGCT TCAGCAACGA CACCGGGTTC
GCGAACAACC GGCAGTGGAG CGTCGGCGCG CAGTACGAGC AGGGCGGCCT GCTGGTCGGC
GCGGCCTTCC TGAATGCGGA CAACCCGGGC GCGACGGCCG GCGGCGCGAT CGCGGGCTCG
GGCTCGGTCG GCGCGGATGC GAACTTCGCG TCCGCGCGGC TGCGGATCTT CGGCGCCGGC
ATCAACTACA CGGCCGGGCC CGCGACGCTC GGCTTCGCGT ACACGAACAG CAATGTCACG
CGGCCGACCG CGAACGTCGG CTACCTGTTC GGCGACGAGA CGATCGAACC CGTCGCGGGG
CCGCTCGCGG GCGGCACGGT CACGGCGATC AAGTACCAGA ACTTCGAAGT GAACGGCAAG
TATCAGTTCA CGCCGGCGTT CTTCGTGGGC GCGCAGTATG TGTATACGAC CGTGCGCTAC
GACGCGACCA CGGGCAGCGC GAAACCGAAG ATCCATTCGA TCGGGCTGAT GGCCGACTAC
AACCTGTCGA AGCGCACCGA CGTGTACCTG ATGGGTGCGT ACCAACGGGT TGCCGGCGAC
GCGACCGGCT CGTCGCTCGA TCAGGCGGTT ATCCCCGGGG CGGCCGATTT GTCGTCGACG
TCGAAGCAAG TGATGGTGCA TGCGGGGATC CGTCACAAGT TCTGA
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| Protein sequence | MNWRLIFVAM PALCAAPAFA QGSVTLYGLV DAGIDYTNNV GGHSAWQMAS GFAQGSRWGL
KGTEDLGGGY SALFQIENGF NVNSGTLAQG GRMFGRQAYV GLGNTRFGTL TLGRQYDSVV
DYLAPTTANG SWGVYPFSHP LDNDNTGNTF RVNNTVKYAS PDFAGFSFGG TYSFSNDTGF
ANNRQWSVGA QYEQGGLLVG AAFLNADNPG ATAGGAIAGS GSVGADANFA SARLRIFGAG
INYTAGPATL GFAYTNSNVT RPTANVGYLF GDETIEPVAG PLAGGTVTAI KYQNFEVNGK
YQFTPAFFVG AQYVYTTVRY DATTGSAKPK IHSIGLMADY NLSKRTDVYL MGAYQRVAGD
ATGSSLDQAV IPGAADLSST SKQVMVHAGI RHKF
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