| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6314 |
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| Symbol | |
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| ID | 4315218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 912054 |
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| End bp | 913187 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638154158 |
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| Product | porin |
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| Protein accession | YP_778192 |
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| Protein GI | 115361055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATA AAACGGCAAT GCTGTGCACG TTGTTCTGTG CGGTAACAAA CGCGTCCGCG
CAGGACAGCG TGACCCTGTA CGGCCTGATC GACCAGGGCA TCGGCTTCAC GAACAACGCC
GCCGGCAAGC AGGCGTGGCA GACGCAGAGC GGCTGGACCG CGGGTGACCG TTGGGGGCTC
AAGGGCGTCG AATCGCTCGG TGCAGGAAAC GCGGCCATCT TTACGCTGGA GAACGGATTT
GTGCTCGATT CGGGCCGGGA TCTGCCGTCG GGTATGCTGT TCGGGCGCCA GGCGTTCGTT
GGCTTGCAGA ACACGCAATG GGGCAGCGTG ACGTTCGGCC GGCAATACGA CTCGATTCAG
GATTACCTTG CGCCACTGAC TGCCAATGGC CGCGATGGCG GATGGCCGTT CGCGCATCCG
TACGACAACG ACAATGCGGT CGCGACGTTC CGCTTGAGCA ACGCCGTGAA ATTCAGTAGC
GCGAACTATG GTGGGCTGCA GTTCGGCGGC GTGTACGCGT TCGGCAATAC GGCGAGCTTC
GCGAACAATC GCAGTTTCAG CCTCGGTATC GCGTACAAAC TATCATCGCT GTCGCTCGCG
GCTGCGTATC TGCAGGCCGA CTCGCCGGGC GCGACGGGCG CTGGCGCCGT ATCGTCGACC
GATGCCAATT TCGTCGCGCG GCGCCAGCGC GTGTGGGGCG CCGGCGCAAA TTATGACTGG
GGGCCAGCGA CGCTCGGCCT GACCTATACG CACACGGTGT TGAACGATCC GGTTTCTTCC
ACCTATTTCG GCACGCTGCC GGCCGGCGCA ACCTTGCTCC GGTTCGACAA CGTCGAGGCA
AACGTCAGGT ATCAGGTCAC GCCGACCGTG GTATTCGCCG CGATGTATGC GTATACGCTC
GGCCGGTTCG ACGGGGCGTC GGGCGAGGCA ACGCCGCGCT GGCATCAGGC CGGCCTGATG
CTCGACTACC TGCTATCCAA GCGGACGTTC CTGTATACGC AGGCGGTCTA TCAGCATGTG
GGCGGCGATG CGGCGGGCAC CGTCTTCGGC AACGCGTACA TCACCGGGTC GGCGGGCATC
TCATCGACCC GCTCGCAGGT GCTTGGCCGC GTCGGTATTC GGACAGTCTT CTGA
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| Protein sequence | MKHKTAMLCT LFCAVTNASA QDSVTLYGLI DQGIGFTNNA AGKQAWQTQS GWTAGDRWGL
KGVESLGAGN AAIFTLENGF VLDSGRDLPS GMLFGRQAFV GLQNTQWGSV TFGRQYDSIQ
DYLAPLTANG RDGGWPFAHP YDNDNAVATF RLSNAVKFSS ANYGGLQFGG VYAFGNTASF
ANNRSFSLGI AYKLSSLSLA AAYLQADSPG ATGAGAVSST DANFVARRQR VWGAGANYDW
GPATLGLTYT HTVLNDPVSS TYFGTLPAGA TLLRFDNVEA NVRYQVTPTV VFAAMYAYTL
GRFDGASGEA TPRWHQAGLM LDYLLSKRTF LYTQAVYQHV GGDAAGTVFG NAYITGSAGI
SSTRSQVLGR VGIRTVF
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