| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6309 |
|---|
| Symbol | |
|---|
| ID | 4315213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 906194 |
|---|
| End bp | 907423 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638154153 |
|---|
| Product | carboxymethylenebutenolidase |
|---|
| Protein accession | YP_778187 |
|---|
| Protein GI | 115361050 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.301282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.405511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAC GACACATCGA GATCCCGTCG CCGGACGGCG GGGCGTTTCG CGCGTACCTG
AGCACGCCGG CCGGCGGCAC GGGGCCGGGC ATCGTGCTGT GTCACGAGAT CTTCGGCGCG
AACGCGACGA TGCGCGACGT GGCCGATTAT TACGCCGAGG AAGGCTATAC GGTGCTCGTG
CCCGATCTGT TCTGGCGCCA GGCGCCCGGC ATCGAACTCG GCTACACCGC GGCCGACGCC
GAGCGCGCGA TGGCGCTGTA CCGCGAGTAC GACGAAAACA AGGGCGTGGA GGACGTCGCC
GCCGCGCTGG CCGTGCTGAC GCAACGGCCG GAATGCACGG GGCGGGCCGG CGTGCTCGGC
TACTGCCTGG GCGGCAAGCT CGCGTATCTC GCCGCGTGCC GGCTGCCGGA CGTGGCGGCC
GCCGTCAGCT ATTACGGCGT GGGGATCGAG CACGCGCTCG ACGAAGCCGC TCACCTGCGC
GGCCGGCTGG TGCTGCAGAT TCCCGCGCAG GACCGCTTCT GCCCGCCCGA CGCGCAGCAG
CGCATCGCCG CCGCGCTGGC GGGGCGCGAC GGCGTCGAGG TATACGTATA CCCGGGCGTC
GATCATGCGT TCGCGCGCGT CGGCGGCGAT CATTTCGACA AGGCGGCCGC GATCATGGCG
CACCAGCGCG CGATCGCCGC GTTCCGAGCG GCGCTCGGCC CGCACTACGA CCTGTCCACG
CTGTGGGAAG CACATCTGCG CCACGAGTTC GACACGCGCA ACGTCGACGC GACGATGGCC
ACGATGGTCG CGCAACCCTA CGTGAACCAT ATCCCGACGC TGACGGGCGG CGTCGGCCAC
GACGAGCTCA AGCGCTTCTA CACGCATCAC TTCGTGCATG CAAACCCGCC GGACACGACG
ATCACGCCGA TCTCGCGCAC GATCGGCGCG AGCCAGATCG TCGACGAGCT GCTGTTCTGC
TTCACGCATA CGACCGAGAT CGACTGGATG CTGCCCGGCG TCGCGCCGAC CGGCAAGCGC
GTCGAGATTC CGCTCGTCGC GATCGTCAAG TTCCGCGGCG ACAAGCTGTA TCACGAACAC
ATCTATTGGG ATCAGGCGAG CGTGCTCGTG CAGATCGGCC TGCTCGACGC GGCCGGGCTG
CCCGTCGCCG GTGTCGAAAC GGCGCGCAAG CTGCTCGACG AAACCGTGCC GTCGAACGGA
CTGATGCAGC GCTGGCACGA CAGCGCGTGA
|
|---|
| Protein sequence | MKGRHIEIPS PDGGAFRAYL STPAGGTGPG IVLCHEIFGA NATMRDVADY YAEEGYTVLV
PDLFWRQAPG IELGYTAADA ERAMALYREY DENKGVEDVA AALAVLTQRP ECTGRAGVLG
YCLGGKLAYL AACRLPDVAA AVSYYGVGIE HALDEAAHLR GRLVLQIPAQ DRFCPPDAQQ
RIAAALAGRD GVEVYVYPGV DHAFARVGGD HFDKAAAIMA HQRAIAAFRA ALGPHYDLST
LWEAHLRHEF DTRNVDATMA TMVAQPYVNH IPTLTGGVGH DELKRFYTHH FVHANPPDTT
ITPISRTIGA SQIVDELLFC FTHTTEIDWM LPGVAPTGKR VEIPLVAIVK FRGDKLYHEH
IYWDQASVLV QIGLLDAAGL PVAGVETARK LLDETVPSNG LMQRWHDSA
|
|---|
| |