Gene Bamb_6268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6268 
Symbol 
ID4315172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp860671 
End bp862059 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content66% 
IMG OID638154112 
Productmajor facilitator transporter 
Protein accessionYP_778146 
Protein GI115361009 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.492492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA CCGTCAATGC CGCCGGCCGG CTCGACCGGC TGCCCGTTTC AAGGTTCCAC 
TGGAAGATAC TTGGATTGAT CGCCGGCGGC GCGTTCCTCG ACGCATTCGA CATCTATCTC
GCCAACGGCT CGGTCGCGTC GATGGTCAAG GACGGCTTCA CCGATCTGCG CCATGGCGCG
ATGTTCGTGT CGTCGACGTT CGTCGGGATG ATGATCGGCG CGTTCGTCGC GGGGTATGTC
GGTGACCGGC TCGGGCGGCG GTATTCGTAT CAGCTCAATC TCGCGGTGTT CGGGCTCGCG
TCGATCGCCG CGTGTTTTGC GCCCGACATC GAATGGTTGA TCGTGCTGCG GTTCATCATG
GGGATCGGGC TCGGCGCGGA ACTGGTCGTT GCAGCCGGGA CGCTCGCCGA GTTCGTGCCG
CCCGACACGC GCGGGAAGTG GGTGTCGCTG CTGGCGATCA TTACCAACAG TGGGCTCTTC
GCCGCGCTGG CCGCGGGGTA CTGGATCATT CCGCATCTCG GCTGGCGCTA TATGTTCGCG
CTGGCCGGTA TCGGTGCGCT GGTCGTGTGG TTCATGCGCA AGCGGATGCC GGAATCGCCG
CGCTGGCTCG AATCCGTCGG GCGGCTCGAC GAGGCGGAGG CGACGCTTGC TGCGATCGAG
CAGGAGGTGA GCCAGCAGGT CGGCGCGCTG CCGCCGGTGC GGCGCACCAT TGATCTGCAT
GTCGGGAAGG TGCCGCTCGG CGTGCTGTTT TCGAAGGGGA TGCGTGGGCG GATGGCGGTT
GCCGCGTTGA CCGCGATCGG CGTGAACGTC GGGCTCTATG GCTTCATTGC ATGGCTGCCA
ACGTTTTTCG TCACGCAGGG GTTGTCGGTC GTCAAGTCGC TCGGGTTCGT GTTCCTGATG
TCGATCGGGT CGCCGGTCGG CGGGTTGATC GGGTATCTGA TCGCGGACCG GATCGGCCGT
GCGCGGGGAA TCGTGATCGC TTCGATTCTC AGCATCGCGC TCGGCTGGCT GTATGTGTCG
CTGCGCGATA CCACGGCGAT CATTCTGGTC GGGTTCTGTC TCGTCAGTGC GATCTATACG
ATCACGACGC TCGGGCTGTT TGGGTATATC CCGGAGCTGT TTCCGACCGA GGTGCGGCTG
CGTGGCACGG GCGTCGCGGG GATGTGCGGG CGGATGTCGT CGATCGGGAC GCCCGCGCTG
GCACTCGCGC TCTATCAGGC GTTCGGCGTG TCGGGCGTGA TCGCGATGGT CAGCGCGACA
CTCGGCGTGC TGTGCGTCGC GATCGGGTTG CTGCGGGTCG AAACGGGGCG GCAAGCGCTG
GAGGAAGTCG CACCGGGGAC GAGCGACGCG GATGGCGCGG CGGTCGCGCC GCGGGTGACC
CAAGTTTGA
 
Protein sequence
MANTVNAAGR LDRLPVSRFH WKILGLIAGG AFLDAFDIYL ANGSVASMVK DGFTDLRHGA 
MFVSSTFVGM MIGAFVAGYV GDRLGRRYSY QLNLAVFGLA SIAACFAPDI EWLIVLRFIM
GIGLGAELVV AAGTLAEFVP PDTRGKWVSL LAIITNSGLF AALAAGYWII PHLGWRYMFA
LAGIGALVVW FMRKRMPESP RWLESVGRLD EAEATLAAIE QEVSQQVGAL PPVRRTIDLH
VGKVPLGVLF SKGMRGRMAV AALTAIGVNV GLYGFIAWLP TFFVTQGLSV VKSLGFVFLM
SIGSPVGGLI GYLIADRIGR ARGIVIASIL SIALGWLYVS LRDTTAIILV GFCLVSAIYT
ITTLGLFGYI PELFPTEVRL RGTGVAGMCG RMSSIGTPAL ALALYQAFGV SGVIAMVSAT
LGVLCVAIGL LRVETGRQAL EEVAPGTSDA DGAAVAPRVT QV