Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6268 |
Symbol | |
ID | 4315172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 860671 |
End bp | 862059 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638154112 |
Product | major facilitator transporter |
Protein accession | YP_778146 |
Protein GI | 115361009 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.492492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAACA CCGTCAATGC CGCCGGCCGG CTCGACCGGC TGCCCGTTTC AAGGTTCCAC TGGAAGATAC TTGGATTGAT CGCCGGCGGC GCGTTCCTCG ACGCATTCGA CATCTATCTC GCCAACGGCT CGGTCGCGTC GATGGTCAAG GACGGCTTCA CCGATCTGCG CCATGGCGCG ATGTTCGTGT CGTCGACGTT CGTCGGGATG ATGATCGGCG CGTTCGTCGC GGGGTATGTC GGTGACCGGC TCGGGCGGCG GTATTCGTAT CAGCTCAATC TCGCGGTGTT CGGGCTCGCG TCGATCGCCG CGTGTTTTGC GCCCGACATC GAATGGTTGA TCGTGCTGCG GTTCATCATG GGGATCGGGC TCGGCGCGGA ACTGGTCGTT GCAGCCGGGA CGCTCGCCGA GTTCGTGCCG CCCGACACGC GCGGGAAGTG GGTGTCGCTG CTGGCGATCA TTACCAACAG TGGGCTCTTC GCCGCGCTGG CCGCGGGGTA CTGGATCATT CCGCATCTCG GCTGGCGCTA TATGTTCGCG CTGGCCGGTA TCGGTGCGCT GGTCGTGTGG TTCATGCGCA AGCGGATGCC GGAATCGCCG CGCTGGCTCG AATCCGTCGG GCGGCTCGAC GAGGCGGAGG CGACGCTTGC TGCGATCGAG CAGGAGGTGA GCCAGCAGGT CGGCGCGCTG CCGCCGGTGC GGCGCACCAT TGATCTGCAT GTCGGGAAGG TGCCGCTCGG CGTGCTGTTT TCGAAGGGGA TGCGTGGGCG GATGGCGGTT GCCGCGTTGA CCGCGATCGG CGTGAACGTC GGGCTCTATG GCTTCATTGC ATGGCTGCCA ACGTTTTTCG TCACGCAGGG GTTGTCGGTC GTCAAGTCGC TCGGGTTCGT GTTCCTGATG TCGATCGGGT CGCCGGTCGG CGGGTTGATC GGGTATCTGA TCGCGGACCG GATCGGCCGT GCGCGGGGAA TCGTGATCGC TTCGATTCTC AGCATCGCGC TCGGCTGGCT GTATGTGTCG CTGCGCGATA CCACGGCGAT CATTCTGGTC GGGTTCTGTC TCGTCAGTGC GATCTATACG ATCACGACGC TCGGGCTGTT TGGGTATATC CCGGAGCTGT TTCCGACCGA GGTGCGGCTG CGTGGCACGG GCGTCGCGGG GATGTGCGGG CGGATGTCGT CGATCGGGAC GCCCGCGCTG GCACTCGCGC TCTATCAGGC GTTCGGCGTG TCGGGCGTGA TCGCGATGGT CAGCGCGACA CTCGGCGTGC TGTGCGTCGC GATCGGGTTG CTGCGGGTCG AAACGGGGCG GCAAGCGCTG GAGGAAGTCG CACCGGGGAC GAGCGACGCG GATGGCGCGG CGGTCGCGCC GCGGGTGACC CAAGTTTGA
|
Protein sequence | MANTVNAAGR LDRLPVSRFH WKILGLIAGG AFLDAFDIYL ANGSVASMVK DGFTDLRHGA MFVSSTFVGM MIGAFVAGYV GDRLGRRYSY QLNLAVFGLA SIAACFAPDI EWLIVLRFIM GIGLGAELVV AAGTLAEFVP PDTRGKWVSL LAIITNSGLF AALAAGYWII PHLGWRYMFA LAGIGALVVW FMRKRMPESP RWLESVGRLD EAEATLAAIE QEVSQQVGAL PPVRRTIDLH VGKVPLGVLF SKGMRGRMAV AALTAIGVNV GLYGFIAWLP TFFVTQGLSV VKSLGFVFLM SIGSPVGGLI GYLIADRIGR ARGIVIASIL SIALGWLYVS LRDTTAIILV GFCLVSAIYT ITTLGLFGYI PELFPTEVRL RGTGVAGMCG RMSSIGTPAL ALALYQAFGV SGVIAMVSAT LGVLCVAIGL LRVETGRQAL EEVAPGTSDA DGAAVAPRVT QV
|
| |