| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6261 |
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| Symbol | |
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| ID | 4315165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 852210 |
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| End bp | 852956 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638154105 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_778139 |
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| Protein GI | 115361002 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTCA AGAACAAGTC CGCGTTGATC ACGGGCGGAA CCAGCGGCAT CGGTCTTGCA
ACCGCGAAGC TGTTCATTGC GGAAGGCGCG CGAGTAGCCG TTACGGGTCG CGACGATTCA
GTATTCGAGC GCGTAAAGGC CGAGCTTGGC GAGCATGCTC TCGTTCTGAA GGGCGACGTG
CGTTCGATCC AGGACATGCG CGCGATTGCC GCCAACGTAA ATGAGCAATT CGGCGGGCTG
GATGTCGTGT TCGCCAACGC CGGCTGGGCT TTCCCGTCCG CGGTCGACGA TATCGACGAC
AAACTCTACG ACGAGATCAT GGACGTCAAC GTCAAGGGTG TGGTGTTCAC GCTTCAAGCG
GCGCTTCCGT ACTTGCGTGA AGGTTCATCA GTGATCCTCA ACACATCATT CGTTGCGCAG
ACCGGCAAGC ACGGCATCTC GTTGACCGCC GCTGCGAAGG CCGCCGTGCG ATCGCTCGCC
CGCAGCTGGT CCTACGAGTT TCTCGACCGG AAAATCCGCT TCAACGCGAT CGCGCCCGGC
GTGATGAACA CGCCCCTGAT CACCAAGTGG GGCATGTCCG ACGAATGGGT TCGCGACCGT
CGGGTCGAGT TCGCCGCGAC GATTCCGGTG GGCCACCTGG GCAAGGCCGA GGACATTGCC
TACGCGGCGC TCTATCTCGC CAGCGACGAA TCCGCCTACG TCGTCGGCAC CGAACTGGTC
GTCGATGGCG GTGCGTCGCA GCTCTGA
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| Protein sequence | MRLKNKSALI TGGTSGIGLA TAKLFIAEGA RVAVTGRDDS VFERVKAELG EHALVLKGDV
RSIQDMRAIA ANVNEQFGGL DVVFANAGWA FPSAVDDIDD KLYDEIMDVN VKGVVFTLQA
ALPYLREGSS VILNTSFVAQ TGKHGISLTA AAKAAVRSLA RSWSYEFLDR KIRFNAIAPG
VMNTPLITKW GMSDEWVRDR RVEFAATIPV GHLGKAEDIA YAALYLASDE SAYVVGTELV
VDGGASQL
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