| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6245 |
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| Symbol | |
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| ID | 4315149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 828564 |
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| End bp | 831917 |
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| Gene Length | 3354 bp |
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| Protein Length | 1117 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638154089 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_778123 |
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| Protein GI | 115360986 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAG TGCACAAGGT CATATGGAGC AAGGCGCGCG GGGCGTTCGT CGCCGCATCG
GAGCTTGGCA AGGCGCGCGG CAAGGGAAGC GCCGGTACGT CGGGTGCCGT ATGCGACGAC
CGACGTACGG AACAACATGC CGCGGCCGGA CAGCAACAGA AAATTCGAAT TCTTCTCGGC
TTTGCGATTC CCGTTTGCCT CGGTGCCGCC GGTCAGATCG CACACGCCCA GTATGCCGCA
GGTAACGGTA GCGCCACGGG GACCGGGGAT GTCGCGATCT CGGGCGCCGG TGGAGCGGCC
GCCACCGCAA GCGGTGGGCT GGGCGTCGCC ATCGGGGGCG GTGCGGTGAC GTCGGGACTG
AACGCGATGG CGCTGGGCAC GAATGCCCAT TCGTCCGCTG CCGGCGCAAT CTCGATGGGC
GCAAACGCGG TGGCTGCGGG CGGCAATGCG CTGGCGATAG GCGTGAACAC GACTGCATCC
GGGCAGACCA GCGCCGCAAT CGGTCCCGCT GCTTTTGCGT CGGGCCTTAT GTCGACGGCG
GTCGGCCCCA ACGCACAGTC CACCGGCGCC GATGCCGTCG CGGTGGGTCG CTTGGCCTCT
GCCACCGACA CCGCCACGAC AGCGGTCGGC ACCAGCGCCG TCGCGGCCAG CACCGGCGCG
AGCGCCTTCG GCCAGGCCGC GACGGCATCC AACAGCAGTT CGACCGCCAT CGGCGGCAAC
ACCACGGCGA GCGGCATTGG TGCGAGCGCG ATTGGACATC AGGCACTGGC GACCGGCACC
AATGCTTCCT CGCTCGGTGC GTCGGCAGCC GCGACCGGCG AAAACGCCAG CGCATTGGGC
GATTTCTCGA CGGCGTCCGG CGTCGGCAGC ACCGCGTTGG GCGCGGGTGC CCGAGCGAGC
GCCGACAACA CTTTAGCCGG CGGCTTGAAC GCAGCCGCCA GCGGCATTTC ATCGATTTCC
TTAGGCAATT CATCGATAGC CTCGAACAAT TCCGCGACGG CGCTCGGCGC CGGCAGCACC
GCATCGGGTG ACCATTCGAC CGCATTGGCG ACAATGTCGA CGGCAGCCGG CGGCTATTCA
ATCGCGATGG GTTTCGATGC GATCACCACC AACACCGCCG CCGCCGGTCT CGCATTGGGA
TCGGGCGCAT CGGCCAGCGG CGCGTCCGGC ATCGCGATCG GCGTCAACAG CGGTGTGTCG
GGCGTCAACG CAATTGCGCT CGGCCCGGGC GGCACGGCCG GCGTCCCCGG TTCCGGCACC
CAGGCGACGG GCGACCAGGC GGTTTCCATC GGCTTCAACG CACTCGCCAG CAACACCGGT
GCGCAGGCAT TCGGCAGCCA GGCGACGGCG AGCGCAACGA GTTCGATCGC CATCGGTAAC
GTAGCCACCG CGTCCGGCGT ATCGGCCGTC GCGCTCGGCT CGGGCGCGAT TGCCAGCGTT
GCCAACAGCG TCGCCCTCGG TGCAGGCTCG ACGACGACCG CGGCGACACC GACATCCAGC
GCGGTGATCG GCGGCGTGAC CTACAACTTC GCGGGTGCAG CACCCGTCGG CGTGGTGAGC
GTCGGCGCGC CGGGCGCCGA GCGGCAGATC CAGAACGTCG CCGCCGGCCA GCTGAGCGGC
GCCAGCACGG ACGCCGTGAA CGGCTCGCAG TTGTTCGCGA CCAACCAGCA AGTGACCGCC
AACACGACGG CGATCTCGAA CATCAGCAAC GGCGCGGGGA TCAAATACTT CCATGCAAAC
TCGACGCTGG CCGACAGCCA GGCAACGGGC ACGGACAGCA TTGCCGTCGG CCCTCAGGCA
GTCGCCAGCG CGGCTGACAG CTTCGCAGCC GGCAGCGGCG CGCAATCGAC CGCCGCAAGC
GGCATGGCGC TCGGCGCGCA GACGACCGCT TCGATCGTCG GCAGTGTAGC GATCGGCTCG
GGCGCCGTGT CGGACCGCGC GATCGCGGCG GGCAGCGGTA CCATCCCGGC CGGCAGCCAC
ACGGTGCCGT TCAACACGTC CGACGCGACG CTGCTCGGCG CGGTGTCGTT CGGCAGTGCA
ACGGGGAACA CCTACCGGCA GCTCATCAAC GTCGCCGACG GCACGAACGC GCACGACGCA
GTGACGGTCC GGCAGTTGAC CGGCGCGCTG CAATCGTTCG CCGTCTCGCC GACGATGTAC
TTCCATGCCA ATTCAACCGC GGCCGATTCG CTCGCCGTGG GCGCGGAGTC GATCGCCGTG
GGGCCGACGA CGGTCGTCAA CGGCGACAAC GGCGTGGGGA TCGGCAATGG TGCGATCGTC
CAGCAGACCG CGCCTGGCGG CGTAGCGATC GGTCAGGCGG CGAATTCGGG GCAGGCCGAT
GCGATCGCAC TCGGCAGCGG CGCGAATGCG ACCGGGCCTC AGTCGATCGC GCAAGGCGCC
AACGCCGTCG CGAGTTCTTC GGGCGGCATC GCGATCGGCT CCGGCGCGAA CAGCAGCGCC
GCCGATGCGA TCGCGCTCGG TTCCGGCGCC AGTGCGAACG TCGCGAACAG CATCGCGATC
GGCGCCGGAT CGGTCACGAC GGTCGGCGCG CAGTCGAACT ACATTGCGTA CGGCCTGAGC
AGCCCGCAGT CGTCGGCCGG CGAGGTCAAC ATCGGTAACC GCAAGATCAC CGGTGTCGCC
GCCGGATCGG CTGGCACCGA TGCGGTCAAC GTCAGCCAGC TCGATGCCGT CAACCAGAAC
CTGACGACGC TGATCCAGAA CATCAGCAAT ACCAACGGCG GCGGCGGTTT CCCGTCGACG
CCGGGCTCGT CGACGCCCCC CGCGTCGACC GGCTCGAATT CGTCGGCCGG CGGCAACGGC
GCGGTCGCGT CCGGTTCGAA CAGTACCGCG GTCGGCAACG GCTCGACCGC GTCGGGCACC
GGCTCGACCA CGATCGGCGC AGGCTCGACG TCGTCGGGCA ACAGCTCGGT GGCGATCGGT
GCGGGCAGCA ACGACGGCGG ACGAAACAAC GTCGTGTCGA TCGGTACGGC CAACTCGCCG
CGGCAGCTCA CGAACGTCGC GGCGGGCACC GCGCCCACCG ATGGCGTCAA CGTCCAGCAG
TTGAATGCCG CGGTCGGCAA CGCGAACGCG TACACCGACG CGAAGATTCA AGGGCTGCGG
CGCGACGCGG ATGCGGGAGC CGCGAGCGCC ATGGCCGTCG CGGGGCTGCC CCAGCCTTCC
GGGCCGGGCA AGAGCATGGT CGCCATCGCC GGCAGCGTCT ATCGAAGCCA GTCCGGGCAG
GCCATCGGCA TCTCCACGAT CTCGGAAAAC AACCACTGGA TCTACAAGGC CGCCATCACG
ACCAACACGC GCAACGACTA CGGTGCCGTG ATCGGTGCGG GCTATCAGTG GTGA
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| Protein sequence | MNRVHKVIWS KARGAFVAAS ELGKARGKGS AGTSGAVCDD RRTEQHAAAG QQQKIRILLG
FAIPVCLGAA GQIAHAQYAA GNGSATGTGD VAISGAGGAA ATASGGLGVA IGGGAVTSGL
NAMALGTNAH SSAAGAISMG ANAVAAGGNA LAIGVNTTAS GQTSAAIGPA AFASGLMSTA
VGPNAQSTGA DAVAVGRLAS ATDTATTAVG TSAVAASTGA SAFGQAATAS NSSSTAIGGN
TTASGIGASA IGHQALATGT NASSLGASAA ATGENASALG DFSTASGVGS TALGAGARAS
ADNTLAGGLN AAASGISSIS LGNSSIASNN SATALGAGST ASGDHSTALA TMSTAAGGYS
IAMGFDAITT NTAAAGLALG SGASASGASG IAIGVNSGVS GVNAIALGPG GTAGVPGSGT
QATGDQAVSI GFNALASNTG AQAFGSQATA SATSSIAIGN VATASGVSAV ALGSGAIASV
ANSVALGAGS TTTAATPTSS AVIGGVTYNF AGAAPVGVVS VGAPGAERQI QNVAAGQLSG
ASTDAVNGSQ LFATNQQVTA NTTAISNISN GAGIKYFHAN STLADSQATG TDSIAVGPQA
VASAADSFAA GSGAQSTAAS GMALGAQTTA SIVGSVAIGS GAVSDRAIAA GSGTIPAGSH
TVPFNTSDAT LLGAVSFGSA TGNTYRQLIN VADGTNAHDA VTVRQLTGAL QSFAVSPTMY
FHANSTAADS LAVGAESIAV GPTTVVNGDN GVGIGNGAIV QQTAPGGVAI GQAANSGQAD
AIALGSGANA TGPQSIAQGA NAVASSSGGI AIGSGANSSA ADAIALGSGA SANVANSIAI
GAGSVTTVGA QSNYIAYGLS SPQSSAGEVN IGNRKITGVA AGSAGTDAVN VSQLDAVNQN
LTTLIQNISN TNGGGGFPST PGSSTPPAST GSNSSAGGNG AVASGSNSTA VGNGSTASGT
GSTTIGAGST SSGNSSVAIG AGSNDGGRNN VVSIGTANSP RQLTNVAAGT APTDGVNVQQ
LNAAVGNANA YTDAKIQGLR RDADAGAASA MAVAGLPQPS GPGKSMVAIA GSVYRSQSGQ
AIGISTISEN NHWIYKAAIT TNTRNDYGAV IGAGYQW
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