Gene Bamb_6205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6205 
Symbol 
ID4315109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp776277 
End bp777059 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content57% 
IMG OID638154049 
Productintegrase catalytic subunit 
Protein accessionYP_778083 
Protein GI115360946 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.346125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCGTA GCACGTTCTA TTACCAGCTT GGGACGCTGA GCGTCGACGA TCGCCGTGCC 
GATCTCAAGG CGAAGATCCG GGCGGTGTTC GACCATCACA AGGGCCGCTA CGGCTATCGA
CGCGTCACGG CTGCGATTCG GCAAACCGGG CATCTCGTCA ACCACAAGGC CGTGCAGAGG
CTGATGCAGC AATTGCAGTT GAAATCCCTG CTGCGCCCGA AGAAATACCG CTCCTGGCGA
GGCGAAGTCG GCAAAGCCGC ACCCAACCTG CTGCAACGTC AGTTTAGTGC CGCACAGGCC
AATCAGAAGT GGGTGACGGA TGTGACGGAA TTCAACGTCG GCGGTCAGAA GCTGTACCTG
TCGCCGGTGA TGGATCTGTA CAACGGCGAG ATCGTGGCTT ACCAGATGGA TCGACGCCCA
AGCTTCGAGT TGGTCAGCGG CATGCTCAAG AAGGCGCTGA CCAAACTCAA ACGCACGGAC
AGACCGCTAT TGCATTCGGA CCAAGGCTGG CAATACCGAA TGCCGGCGTT TCGCCGGCAA
CTGAAGCGGC GCAAACTGAC TCAAAGCATG TCCCGCAAGG GGAACTGCCT CGATAATGCT
GCGATGGAAA GCTTCTTCGG CACGCTCAAG TCCGAGTGCT ACAAGGGACA TCGCTTCACT
TGCGTGGAGC ATTTGCGCGA CACGCTCAAT CACTACATCC ACTACTACAA CCACGAACGC
ATCAAGCTCA AATTGAAAGG GCTGAGTCCC GTGCAATACA GAACTCAGCC CTTGAGCGCC
TAG
 
Protein sequence
MARSTFYYQL GTLSVDDRRA DLKAKIRAVF DHHKGRYGYR RVTAAIRQTG HLVNHKAVQR 
LMQQLQLKSL LRPKKYRSWR GEVGKAAPNL LQRQFSAAQA NQKWVTDVTE FNVGGQKLYL
SPVMDLYNGE IVAYQMDRRP SFELVSGMLK KALTKLKRTD RPLLHSDQGW QYRMPAFRRQ
LKRRKLTQSM SRKGNCLDNA AMESFFGTLK SECYKGHRFT CVEHLRDTLN HYIHYYNHER
IKLKLKGLSP VQYRTQPLSA