Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6205 |
Symbol | |
ID | 4315109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 776277 |
End bp | 777059 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638154049 |
Product | integrase catalytic subunit |
Protein accession | YP_778083 |
Protein GI | 115360946 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.346125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGCGTA GCACGTTCTA TTACCAGCTT GGGACGCTGA GCGTCGACGA TCGCCGTGCC GATCTCAAGG CGAAGATCCG GGCGGTGTTC GACCATCACA AGGGCCGCTA CGGCTATCGA CGCGTCACGG CTGCGATTCG GCAAACCGGG CATCTCGTCA ACCACAAGGC CGTGCAGAGG CTGATGCAGC AATTGCAGTT GAAATCCCTG CTGCGCCCGA AGAAATACCG CTCCTGGCGA GGCGAAGTCG GCAAAGCCGC ACCCAACCTG CTGCAACGTC AGTTTAGTGC CGCACAGGCC AATCAGAAGT GGGTGACGGA TGTGACGGAA TTCAACGTCG GCGGTCAGAA GCTGTACCTG TCGCCGGTGA TGGATCTGTA CAACGGCGAG ATCGTGGCTT ACCAGATGGA TCGACGCCCA AGCTTCGAGT TGGTCAGCGG CATGCTCAAG AAGGCGCTGA CCAAACTCAA ACGCACGGAC AGACCGCTAT TGCATTCGGA CCAAGGCTGG CAATACCGAA TGCCGGCGTT TCGCCGGCAA CTGAAGCGGC GCAAACTGAC TCAAAGCATG TCCCGCAAGG GGAACTGCCT CGATAATGCT GCGATGGAAA GCTTCTTCGG CACGCTCAAG TCCGAGTGCT ACAAGGGACA TCGCTTCACT TGCGTGGAGC ATTTGCGCGA CACGCTCAAT CACTACATCC ACTACTACAA CCACGAACGC ATCAAGCTCA AATTGAAAGG GCTGAGTCCC GTGCAATACA GAACTCAGCC CTTGAGCGCC TAG
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Protein sequence | MARSTFYYQL GTLSVDDRRA DLKAKIRAVF DHHKGRYGYR RVTAAIRQTG HLVNHKAVQR LMQQLQLKSL LRPKKYRSWR GEVGKAAPNL LQRQFSAAQA NQKWVTDVTE FNVGGQKLYL SPVMDLYNGE IVAYQMDRRP SFELVSGMLK KALTKLKRTD RPLLHSDQGW QYRMPAFRRQ LKRRKLTQSM SRKGNCLDNA AMESFFGTLK SECYKGHRFT CVEHLRDTLN HYIHYYNHER IKLKLKGLSP VQYRTQPLSA
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