| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6155 |
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| Symbol | |
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| ID | 4315059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 717855 |
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| End bp | 719450 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153999 |
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| Product | general substrate transporter |
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| Protein accession | YP_778033 |
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| Protein GI | 115360896 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGCG CCGCGCCCTC GACATCACGG CGATCCAGAG ACAACCGCCT TCGTCCCCGA
CGGTTCCGCG CCCGCCCCCC GTGCGCCCGC TCGGCCGGCC GCGAAGGCTC CTTCCAGGAG
CGTTCCTTGA GTTCATCGCA AGCGCACCCC GCGAAAGCCC GGTCTTCGCG CAAGGCCCTG
AAGCTGGACG ACATCACGAT CGTCGACCCG GCCGTCCTGA AACGCGCGGT CGGGGCCATG
GCGTTCGGCA ACGCGATGGA ATGGTTCGAC TTCGGCGTCT ACAGCTATAT CGCCGTCACG
CTCGGCAAGG TGTTCTTCCC ATCGAGCAGC CCGTCCGCTC AGCTGCTCGC GACCTTCGGC
ACGTTCGCGG CCGCGTTCCT CGTGCGCCCG CTCGGCGGCA TGGTGTTCGG CCCGCTCGGC
GACCGCATCG GCCGCCAGCG CGTGCTCGCC GCCACGATGA TCATGATGGC CGTCGGCACC
TTCGCGATCG GCCTGATTCC CAGCTATGCA TCGATCGGCA TCATGGCGCC CGTGCTGCTG
CTCGTCGCCC GCCTCGTGCA GGGCTTCTCG ACCGGCGGCG AATACGGCGG CGCCGCCACC
TTCATCGCGG AGTTCGCGAC CGACCGGCGC CGCGGCTTCA TGGGCAGCTT CCTCGAGTTC
GGCACGCTGA TCGGCTACAC GCTCGGCGCG GCCACCGTCG CGGTGCTGAC GGCCACGCTG
TCGCAGGAAG CACTGTTGTC GTGGGGCTGG CGCGTGCCGT TCTTCATCGC CGGGCCGCTC
GGCCTCGTCG GCCTCTACGT GCGGCTCAAG CTCGAGGAAA CGCCCGCGTT CAAGAAGGAA
GCCGAATCGC GCGAAGCGGA CGAACGAGGG CGTCCGAGGC AGTCGTTCGG CACGCTGCTC
GTCGAACAGT GGAGGCCGCT GCTGCAGTGC GTCGGCCTCG TGCTGATCTT CAACGTGACC
GACTACATGG CGCTGTCGTA CCTGCCGAAC TACCTGTCGG CGACGCTGCA CTTCAACGAG
ACGCACGGCC TCTTCATGGT GCTGATCGTG ATGGTGCTGA TGATGCCGAT GACGCTCTAC
GCGGGCCATC TGTCCGACCG CGTCGGCCGC AAGCCGGTGA TGATGGCCGG CTGCGTCGGC
CTGCTCGTGC TGTCGGTGCC GGCGCTGCTG CTGATCCGTA CGGGCGGGAT GCTGCCCGTG
TTCGGCGGGA TGCTGATCTA CGGCACGCTG CTGTCGACCT TCACCGGCGT GATGCCGTCC
GCGCTGCCCG CGCTGTTCCC GACGCGGATC CGCTACGGCG CGCTCGCGAT CGGCTTCAAC
GTGTCGGTGT CGCTGTTCGG CGGCACGACG CCGCTCGTCA CCGCATGGCT CGTCGATCGC
ACCGGCGACC TGATGATGCC GGCCTACTAC CTGATGGGTG CGTCGTTCAT CGGCATCGTG
TCGGTGCTCG CGGTGCGCGA AACCGCGCGG CGGCCGCTGC CCGGCTCCGC GCCGTGCGTC
GCGAGCCGCG CGGAAGCGCA GGACCTGATT CGCCGCGGCG CCGACGAAGG CCGCGTGCGC
GACCGCAAGT TCACGCCGAT CGGCGAACGC GCGTAA
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| Protein sequence | MARAAPSTSR RSRDNRLRPR RFRARPPCAR SAGREGSFQE RSLSSSQAHP AKARSSRKAL
KLDDITIVDP AVLKRAVGAM AFGNAMEWFD FGVYSYIAVT LGKVFFPSSS PSAQLLATFG
TFAAAFLVRP LGGMVFGPLG DRIGRQRVLA ATMIMMAVGT FAIGLIPSYA SIGIMAPVLL
LVARLVQGFS TGGEYGGAAT FIAEFATDRR RGFMGSFLEF GTLIGYTLGA ATVAVLTATL
SQEALLSWGW RVPFFIAGPL GLVGLYVRLK LEETPAFKKE AESREADERG RPRQSFGTLL
VEQWRPLLQC VGLVLIFNVT DYMALSYLPN YLSATLHFNE THGLFMVLIV MVLMMPMTLY
AGHLSDRVGR KPVMMAGCVG LLVLSVPALL LIRTGGMLPV FGGMLIYGTL LSTFTGVMPS
ALPALFPTRI RYGALAIGFN VSVSLFGGTT PLVTAWLVDR TGDLMMPAYY LMGASFIGIV
SVLAVRETAR RPLPGSAPCV ASRAEAQDLI RRGADEGRVR DRKFTPIGER A
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