Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6068 |
Symbol | |
ID | 4314972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 628391 |
End bp | 629323 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638153912 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_777946 |
Protein GI | 115360809 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.979336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCG CGAATCGCCT GTTGTCCGCC TGTGTGCTGG GCGTGGGCTT CCTGTTCCTG TACGTGCCGA TCGCGAGCCT CGTCGTCTAT TCGTTCAACG CGTCGAAGCT CGTGACGGTG TGGTCCGGCT TCTCGTTTCG CTGGTACGGC GTGCTACTGC ACGACGGCGA ACTGCTGACG GCCGCGTGGC TGTCGCTGAA GATCGCGGTG CTGACGGCGA CCGCGTCGGT CGCGATCGGC ACCTGGGCCG GCTTCGTGCT GGCCCGCATG GGGCGCTTTC GCGGCTTCAC GCTCTATGCG GCAATGATCA ACGCGCCACT GGTGATTCCC GAAGTGATCC AGGGCATCTC GCTGCTGCTG CTGTTCGTCG CGATGCAGCA GACCTTCGGC TGGCCTGCCG GGCGCGGCTG GCTGACGATC TGGATCGGCC ACGTGATGCT GTGCCTGTCG TTCGTCGCGG TGATCGTGCA GTCGCGCGTG AAGGAGCTCG ATCGCTCGAT CGAGGAAGCC GCGCTCGACC TCGGTGCCCG GCCGTTGAAG GTGTTCTTCG TGATCACGCT GCCGCTGATC GCGCAGGCGC TGGTGTCCGG CTGGCTGCTC GCGTTCACCG TGTCGATCGA CGACGTCATT CTTTCTGCCT TCCTGTCGGG CCCCGGTTCG ACGACGCTGC CGCTCGTCGT GTTCTCGCGC GTGCGGCTCG GCTTGAACCC GGAGATGAAC GCGCTCGCGA CGGTGTTCAT CACGGTCGTG ACGATCGGCG TCGTCGTCGT GAACCGCTCG ATGCTGGCCC GCGAGCGACG GCAAGCCCGC GACGCCCGTG CGTGGCACGC GGCCTGCGCG CCGGACGCAC CGTCTGCACC GACGGTCTCG CCGCCCGCTC GCGCGTCGGC CGTGCACGCG CGCCGCGACC CCGCACCGCA TCCCGTGAAG TGA
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Protein sequence | MTRANRLLSA CVLGVGFLFL YVPIASLVVY SFNASKLVTV WSGFSFRWYG VLLHDGELLT AAWLSLKIAV LTATASVAIG TWAGFVLARM GRFRGFTLYA AMINAPLVIP EVIQGISLLL LFVAMQQTFG WPAGRGWLTI WIGHVMLCLS FVAVIVQSRV KELDRSIEEA ALDLGARPLK VFFVITLPLI AQALVSGWLL AFTVSIDDVI LSAFLSGPGS TTLPLVVFSR VRLGLNPEMN ALATVFITVV TIGVVVVNRS MLARERRQAR DARAWHAACA PDAPSAPTVS PPARASAVHA RRDPAPHPVK
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