| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6063 |
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| Symbol | |
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| ID | 4314967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 622728 |
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| End bp | 623900 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153907 |
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| Product | porin |
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| Protein accession | YP_777941 |
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| Protein GI | 115360804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TCCGGACATT CGCGCTGCTC GCCCTGCCGG CCTCGCTCCA TGCCGCCGGC
GCGCACGCGC AAAGCAGTGT GACGCTGTAC GGCATCGCCG ATGCGGGCAT CGCGTACGTG
CACAACGTGC GCAACGCGAA CGGCAGCAAT GCGTCGAACC TCGTCAGGTT CAGCAGCGGC
AACCTGTCCG GCAGCCGCTG GGGGCTGCGC GGCATCGAGG ATCTCGGCGG CGGGCTGTCC
GCGCTGTTCC AGCTCGAGAA CGGCTTCAAC CTCGGCACCG GCGCGCTCGG CCAGGGCGGG
CGCGAATTCG GCCGCAAGGC CGTCGTCGGC CTCGCGAGCA ACACCTACGG CACCGTGACG
CTCGGCCGCC AGTACGATCC GGTCGTCGAT CTCGTGCAGG GCCTCACCGA GGACAACTAC
TTCGGCGGCG TATTCGCAAC GCCAGGCGAC CTCGACAACT ACGACAACAG CCTGCGCGTC
AGCAACTCGG TGAAATACAC GAGCCCGTTG ATCTCCGGCT TCCAGTTCGC CGCGCTGTAC
GGCTTCGGCG GCGTCGCGGG CGCGACCGGC AGCGGCCGCA CCTACAGCTT CGGCCTGAGC
TATGCGAACG GCCCGCTGTC GCTCGGCGCC GGCTACTTCT TCGCGAACGG CGGCTCGACG
GTCGCGAGCG GCGTGCGCAC GTGGTCGAGC AGTTCGGACA CGCTGTTCAA CACCGTGATC
AACCAGGGCT TCTCGAGCGC GAAGTCGATC CAGATCGTGC GCGTGGCCGG CCAGTACGTG
GCCGGGCCGG CGACCTTCGG CCTCGCGTAT TCGAACACGC AGTACGGCGC GGACACGCTG
TCGGCCTTCA CGCAGAATGC GAAGTTCAAC AACGGCTCCG CGTTCTTCAA CTGGCAGTTC
TCGCCGGCGC TGCGCGCGGG CGTCGGCTAC AACTACACGT CGCTGACGGG CCCGACCGCC
GCGCACTACA ACCAGGTGAA CCTCGGCGCG GACTACGCGC TGTCGAAGCG CACCGACCTG
TATGCGCTGT TCGGCTATCA GAAGGCGAGC GGCAATACGT TGAATGCGAG CGGCGCGATC
GTGAAGGCCG CGGCATCGGT CGGCTCGTAT GGCGTGAACT CCGGAACCGA TACACAGGAA
CTCGCGATCG TCGGCATCCG TCACAAGTTC TGA
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| Protein sequence | MKRIRTFALL ALPASLHAAG AHAQSSVTLY GIADAGIAYV HNVRNANGSN ASNLVRFSSG
NLSGSRWGLR GIEDLGGGLS ALFQLENGFN LGTGALGQGG REFGRKAVVG LASNTYGTVT
LGRQYDPVVD LVQGLTEDNY FGGVFATPGD LDNYDNSLRV SNSVKYTSPL ISGFQFAALY
GFGGVAGATG SGRTYSFGLS YANGPLSLGA GYFFANGGST VASGVRTWSS SSDTLFNTVI
NQGFSSAKSI QIVRVAGQYV AGPATFGLAY SNTQYGADTL SAFTQNAKFN NGSAFFNWQF
SPALRAGVGY NYTSLTGPTA AHYNQVNLGA DYALSKRTDL YALFGYQKAS GNTLNASGAI
VKAAASVGSY GVNSGTDTQE LAIVGIRHKF
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