| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6028 |
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| Symbol | |
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| ID | 4314932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 582510 |
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| End bp | 583868 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638153872 |
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| Product | major facilitator transporter |
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| Protein accession | YP_777906 |
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| Protein GI | 115360769 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.672209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA TAGACGTGTA CTCACTCGCC GGTCGGGCCA GATTCAATGG CTTTCATGCC
CTTGTGCTGT TCTGGTGTGT CCTGATGTTG ATACTCGACG GCTACGATCT TGCCGTCGTC
GGCGCGGCGC TGCCGTCGAT CATGAAGGAC ATGCACATCG ACGCGACCAG CGCGGGCATC
ATGGCTGGCT CGACGCTGTT TGGCGTCATG CTCGGGGCCA TTTTCCTCGG CACGCTAGCT
GACCGTTTCG GACGACCAAC TATGATGTGC GTTTGCGTGG CGCTGTTCAG TCTGTTCACC
GCGGCCGCCG GGTTGACGAG CGATCCCGTC AGTTTCAGCG TCACGCGCTT CGTCGCCGGC
CTGGGCATTG GCGGCGTGTT GCCGATCGTC ACCGCGCAGA TGGCGGAGTT TTCGCCCAAT
GCGTTGCGAA CCCGCTTGGT CACGCTGGTG TTCGCCGGAT ATTCGATTGG CGGAATTCTG
GTGGCGCTGA CCGCGAAGCA GCTGATCGGC AGCTACGGCT GGCAATCGGT CTTTTTCGCC
GCGGGCCTGC CCGTCCTGCT GATCCCGTTC ATCATCAAGA CAATGCCCCA TTCAATGGTC
TTTCTGATCA AACGCGGCCG GCACGACAAA CTGCGCGCGG TGCTGAAGCG GTTGGTGCCC
GACTATTCGT CGAGCGGTCA AGAGCAGTTT GCGGGAGGTT CGTCAGACAA AGCCCAGGAC
GCCTCGGTGC GACGCCTCTT CCAGGACGGG CGCGGCTTCA GTACCTCGAT GATCTGGGTT
GCGTTCATGA CGGGCCTCTT CATGGTCTAC GCGCTCAGTT CGTGGTTGAC CAAGCTGATG
GCCATGGCCG GATATAGCCT CGGCTCGGCG TTGAACTTCG TGATTGTGTT CAACGTCGGC
GCCATCGCCG GTGCGATCTT CGGCGGCTGG CTCAGCGACA AGGTCAACAT CAAGCGCGTG
CTGATTGCGT TTTACGTCGT CGGGGCGGTT GCGCTGTCAC TGATGGGCTA CACGAAGTCG
ACCGTATCGT TGTTTGTCGT CGTATTCGTG GTCGGCGCAT CGACGCTCGG TACGCAATTG
CTTGCGTACG CGTATGCCGG TGACTTCTAT CCCCATGCGA TCCGGTCTAC GGGTGTCGGC
TTTGCTTCCG GCGTGGGCCG GATCGGCGCG ATCGTGGCGC CGGTGCTCAT CGGTTGGCTC
GTGTCCTTGA AGCTGCCGCT CGAGCAGAAT TTCATGGCCA TCGGCCTGGC GGGCCTCGTC
GGCGCGGCGG CGGTGACGCT GATCAACCAG ACACGTGCCG ACTCGCATCG CTCGAACAGT
GCGCCTGTTG TCGCGGTTCA GGGTAGCGCC GGCAGCTGA
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| Protein sequence | MNQIDVYSLA GRARFNGFHA LVLFWCVLML ILDGYDLAVV GAALPSIMKD MHIDATSAGI
MAGSTLFGVM LGAIFLGTLA DRFGRPTMMC VCVALFSLFT AAAGLTSDPV SFSVTRFVAG
LGIGGVLPIV TAQMAEFSPN ALRTRLVTLV FAGYSIGGIL VALTAKQLIG SYGWQSVFFA
AGLPVLLIPF IIKTMPHSMV FLIKRGRHDK LRAVLKRLVP DYSSSGQEQF AGGSSDKAQD
ASVRRLFQDG RGFSTSMIWV AFMTGLFMVY ALSSWLTKLM AMAGYSLGSA LNFVIVFNVG
AIAGAIFGGW LSDKVNIKRV LIAFYVVGAV ALSLMGYTKS TVSLFVVVFV VGASTLGTQL
LAYAYAGDFY PHAIRSTGVG FASGVGRIGA IVAPVLIGWL VSLKLPLEQN FMAIGLAGLV
GAAAVTLINQ TRADSHRSNS APVVAVQGSA GS
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