Gene Bamb_6027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6027 
Symbol 
ID4314931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp581666 
End bp582430 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID638153871 
Productnitroreductase 
Protein accessionYP_777905 
Protein GI115360768 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGT GCAACGCACC TTTCAATGCC GGTATCGAAA TGGACCGCCT TTCTCCTCCT 
CCGTTGAACA CGTTCGCCGA CGTGGCCCAC GCCGTCGATT GGGCGCTCGT CACGCGGCGC
AGCGTCCGTG CTTTCCTGCC CACGCCGGTT CCTCGCGAGC ACATCGAGGC CATCCTCGAC
GTGGCGCGCT TCAGCGCAAC CGGCGTCAAC ATCCAGCCGT GGCATGTGCA TGTCGTGACC
GGCGCGACGA AGTCCCGCCT GTCTGCCGCC ATCAACGAGA TCAATGACGA TCCTGACCGC
AGCTCCGACC TGGACGAGCC CTACGACTAC TACCCGCGCG AATGGATCGC ACCGTATGTG
GATCGCCGGC GCGCGGTTGG CTGGAACCTG TATGGCTTGC TGGGCATCGA GAAGGGTGAC
AAGGAGCGCA TGCACGTCCA GCACGGTCGC AACTACAACT TCTTCGACGC ACCGGTGGGC
CTGTTCTTCA CGGTTGACCG GGTTATGCGT GAAGGCAGTC TGCTCGACAC GGGGATGTTC
CTGCAAAGCG TGATGATCGC CGCCCGGGCG CGCGGCCTCG ACACCTGCCC GCAGGCGGCC
TTCAACAAGT TCCACCGCGT CATCGCCAAC GAACTGTCCA TTCCCGACAA CCAGATGTTG
GTGTGCGGCA TGAGCCTCGG TTATGCGGAT CACGGCTGCA TCGAGAACAC GCTGGTGACG
GAGCGCAGTC CGGTACGCGA TTTCACCACT TTTTATAATG AATGA
 
Protein sequence
MAQCNAPFNA GIEMDRLSPP PLNTFADVAH AVDWALVTRR SVRAFLPTPV PREHIEAILD 
VARFSATGVN IQPWHVHVVT GATKSRLSAA INEINDDPDR SSDLDEPYDY YPREWIAPYV
DRRRAVGWNL YGLLGIEKGD KERMHVQHGR NYNFFDAPVG LFFTVDRVMR EGSLLDTGMF
LQSVMIAARA RGLDTCPQAA FNKFHRVIAN ELSIPDNQML VCGMSLGYAD HGCIENTLVT
ERSPVRDFTT FYNE