| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6017 |
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| Symbol | |
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| ID | 4314921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 569482 |
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| End bp | 570894 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153861 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_777895 |
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| Protein GI | 115360758 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.488047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGGA CCGAGGTATC GGCGCGCTGG CACGACGCGA TCGGCGCGGT GCACGGCATC
GAGTCGAAAT ACAAGCGGCT CGTGAAGGCG ATCGCCACCG ACATCGAAAG CGGCGCGCTC
GCACCGGGCG CGCGGCTCGC GCCGCAGCGC GACGTGGCGT CGAGCCTCGG CGTCAGCGTG
CAGACCGTCA CCAATGCCTA CAAGGAACTC GAAAGGCAGG GGCTGATCCG CTGCGAAGTC
GGGCGCGGCA GCTTCGTGGC CGCCCGCGTG ACCGAATCGA TGTCGAACTA CATCCTCGAT
ACGGCCGAGC GCGAGCTGGT CGACTTCTCG ATCGCGCGCA TCGTGCATAC GCCGGAGCAC
GATGCCGCGT GGCGGGGCGT CTGCGCGGCG ATGGCCGACA CCGACGACCA GCCGTGGATC
CGCTCGTTCC GGCCGATCGC GGGCCTCGAC GCGCATCGCG AGGCCGGCGC CGCGTGGCTC
GGGTCGCTGA ACCTGCCGGT CCATCCCGAA TCGCTGCTGA TCACGAACGG CGCGGCGCAC
GGCATCTTTC TCGCGCTCGC GTCGATCGTC GGGCCGGGCG ACACCGTGCT GTGCGAGAGC
CTGACCGACC ACGGCGTGAT CGGCTCGGCG AACGTGCTCG GGTTTACGCT GAAAGGGCTC
GAGATGGACG AACATGGGAT CCGTCCCGAA CATTTCGAAG AAATGTGCGA CGGCGAGCGG
ATCAGTGCGC TCGTCTGCAC GCCGACCCTC AATAACCCGA CGGTGTCGAT GATGTCCGAT
TCGCGCCGCA AGTCGATCGC GCGCATCGCG TCGCGCTACG GCGTGTACGT GATCGAGGAC
GACGTGTACG GCCCGCTCCC TGCGAAGACG GCGACTCCGA TCGCGAGCCT GATTCCGGAG
CTGGGCTTCT ACTGCACGAG CATGACGAAA TCCGTGCTCA CCGGATTGCG CACCGGTTAT
CTCGCGATGC CGAGGCGGCT CGCGTTGCGC GTCGAGAGCG TGCTGCGCGT GAGCAGCTGG
ATGGCGACGT CGCCGATCGC GGAGATCGCG ACGCGCTGGA TCGCCGACGG CACAGCGCGC
AGGCTCGTCG AACTGCAGCG GCAGCGGCTC GCGGCGCGTC AGGAGATGGT GAAGGCCGCG
CTTGGGCCCT ATGTGCTGGG TGCGCATCCG AATGCATTGT CGGCGTGGCT GCGCGTGCCC
GACTACTGGC AGGCCGACCG GCTCGTGCGC GAATTGCGTA CCCGCAAGAT CGCGGTGACG
TCGCCCGACC CGTTCCTCGT CGGCGGCACG GAGCGGCCGA ACGCGGTGCG CGTGTGTATC
GGCGCGGAGA CGACGGATGC CGCATGCAAC GCCGCGCTCC AGACCATCGC GGGCGTGTTC
GAGCAGTATC CGCACGTGCA CGATTTTCAC TGA
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| Protein sequence | MGRTEVSARW HDAIGAVHGI ESKYKRLVKA IATDIESGAL APGARLAPQR DVASSLGVSV
QTVTNAYKEL ERQGLIRCEV GRGSFVAARV TESMSNYILD TAERELVDFS IARIVHTPEH
DAAWRGVCAA MADTDDQPWI RSFRPIAGLD AHREAGAAWL GSLNLPVHPE SLLITNGAAH
GIFLALASIV GPGDTVLCES LTDHGVIGSA NVLGFTLKGL EMDEHGIRPE HFEEMCDGER
ISALVCTPTL NNPTVSMMSD SRRKSIARIA SRYGVYVIED DVYGPLPAKT ATPIASLIPE
LGFYCTSMTK SVLTGLRTGY LAMPRRLALR VESVLRVSSW MATSPIAEIA TRWIADGTAR
RLVELQRQRL AARQEMVKAA LGPYVLGAHP NALSAWLRVP DYWQADRLVR ELRTRKIAVT
SPDPFLVGGT ERPNAVRVCI GAETTDAACN AALQTIAGVF EQYPHVHDFH
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