Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6013 |
Symbol | |
ID | 4314917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 565210 |
End bp | 566205 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638153857 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_777891 |
Protein GI | 115360754 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAAA CCTGGCTCTC GGCAGGGCAG ATCCTGCTCA CCCTGATCGT CGTCGTCGTG GCCGCCCTCG TGCTGTGGCG GATCATCAAC TACTACATGT TCTCGCCGTG GACACGCGAC GGGCACGTGC GCGCCGACGT GATCCAGGTC GCGCCCGACG TAGCGGGGCT CATCACCGCC GTGCAGGTCG CCGACAACCA GGAGGTCAAG CGCGGCCAGG TGCTGTTCGT GATCGACCAG GCGCGCTACG CGCTCGCGGA ACGGCTGGCC GAAGCGACGC TCGCGCAGCG CCGCGCGACG CTCGCCCAGG CGAAGCGCGA ATACACGCGC AACCTGCAGC TCGGCAACCT GGTCGCCAGC GAACAGGTCG AGGAAAGCCG CACGCGCGTC GAGCAGGGCG AAGCCGCCGT CGCCGATGCG CAGGTATCGC TCGACACCGC GAAGCTGAAC CTGCAGCGCA CGACGATCGT GAGCCCCGTC GACGGCTACC TGAACGACCG TGCGCCGCGC GTCGGCGAAT ACGTGCCGGC CGGCCGCGCG GTGCTGTCGG TCGTCGACCG CAATTCGTTC CGCGTCGACG GCTACTTCGA GGAAACCAAG CTGCGCGGCA TCCACATCGG CCAGCCGGTC GACATCGTCG TGATGGGCGA GCCGCATCCG CTGCGCGGCC ACGTGCAGAG CATCGTCGCC GCGATCGAGG ATCGCGACCG CACGCAGGGC GCAAATCTGC TGCCGAACGT GAACCCGGCA TTCAGCTGGG TGCGGCTTGC GCAGCGCGTG CCGGTGCGCG TCGTGCTCGA CGAGGTGCCC GACGACTTCC GGATGATCGC CGGCCGCACC GCGACCGTCG CGGTGCGCAC CGATACGCGC CACGACGACA AGACGAAGCC GGCTGCCGGC GCTTCCGCGG CAGCCGTGCC ATCCGCTTCG TCGCCCACTT CGGCGCCCGC GGCATCCGCG CCGGCGGCCG TCAGCGCGAC GGGAGCATCG CAATGA
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Protein sequence | MKKTWLSAGQ ILLTLIVVVV AALVLWRIIN YYMFSPWTRD GHVRADVIQV APDVAGLITA VQVADNQEVK RGQVLFVIDQ ARYALAERLA EATLAQRRAT LAQAKREYTR NLQLGNLVAS EQVEESRTRV EQGEAAVADA QVSLDTAKLN LQRTTIVSPV DGYLNDRAPR VGEYVPAGRA VLSVVDRNSF RVDGYFEETK LRGIHIGQPV DIVVMGEPHP LRGHVQSIVA AIEDRDRTQG ANLLPNVNPA FSWVRLAQRV PVRVVLDEVP DDFRMIAGRT ATVAVRTDTR HDDKTKPAAG ASAAAVPSAS SPTSAPAASA PAAVSATGAS Q
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