| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5995 |
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| Symbol | |
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| ID | 4314899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 543030 |
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| End bp | 544001 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153839 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_777873 |
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| Protein GI | 115360736 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.135775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.729342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATC GACTATCCAG ATCCCGCCGC CGGCTCATCC AGGCCGGTCT GGCGCTCGCG
GCCGGCGCTG CCGCCCAGCC GCGCTTCGCG CTCGCTGCCG CGGCCGGCGC ACGCACGTTG
CGCATCGGCT ATCAGAAAGG GCCGCTCAGC CTGCTGAAGG CGAGAGGCAC GCTGCAGGAC
AAGCTCGCGA CGCTCGGTGT GAACGTGACC TGGACCGAGT TCCCGTCGGG GCCGCCGCAG
CTCGAGGCGC TCAACGCCGG GTCGATCGAC TTCGGCGATG TCGGCGAGGC GCCGCCGATT
TTTGCGCTCG CGGCGGGTGC GCCGCTCGTC TACTACGCGC AAACGCCGGC AGGGCCCTCG
ACCGAGGCCG TGGTCGTCGC GAAGGATTCG CCGGTCAGGA CCTTCGCGGA TTTGCGCGGC
AAGCGCATCG CGCTGGTGAA GGGATCCAAC ACGCACTTCC TGCTGGTCCG CTTGCTGCAG
GCCGCGAAGC TCGACTTTGC GGACGTCAAG CCGGTCTGGT TGTCTCCGTC CGATGCGCGC
GCCGCGTTCG AGAACCGCTC GGTCGACGCG TGGATCATCT GGGATCCGTT TCTCGCCGTC
GTCCAGCAGA CGTTGGGCGC GCGCATCGTC GCGGATGGCA CGGGGCTCGT CGAGAACCGC
AGCTACTACT TCGCGTCGCG CACCTATGCG CAGCGCAATG CCGACGTGCT GGGTGTGGCC
GTGTCCGAGC TCACGACGGT CCAGCGATGG CTCGATGCGA ATCGCGCGCA GGGTGCGGCC
GAGTTCTCGA AACTGTGGGG CATTCCGGAG CCGGCCGTGG CGCTCGCGTT TCGCCGTGCG
CGCTTCGGTG TCGAACCGGT GACGCGCGAG ACGCTCGCGT ACCAGCAGCA CATCGCGGAC
GTGTTCTATC AGGCAGGCAT CCTGCCGAAA CGCGTGGACG TCAGCCAGGC GGCGCCGCCC
ACGCTCGCGT GA
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| Protein sequence | MADRLSRSRR RLIQAGLALA AGAAAQPRFA LAAAAGARTL RIGYQKGPLS LLKARGTLQD
KLATLGVNVT WTEFPSGPPQ LEALNAGSID FGDVGEAPPI FALAAGAPLV YYAQTPAGPS
TEAVVVAKDS PVRTFADLRG KRIALVKGSN THFLLVRLLQ AAKLDFADVK PVWLSPSDAR
AAFENRSVDA WIIWDPFLAV VQQTLGARIV ADGTGLVENR SYYFASRTYA QRNADVLGVA
VSELTTVQRW LDANRAQGAA EFSKLWGIPE PAVALAFRRA RFGVEPVTRE TLAYQQHIAD
VFYQAGILPK RVDVSQAAPP TLA
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